Gene : Medtr2g082580 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33399:SF2 - PSBQ-LIKE PROTEIN 2, CHLOROPLASTIC Description:  oxygen-evolving enhancer protein
Genomic Order:  4327 Name:  ? Medtr2g082580
Secondary Identifier:  ? PAC:31067259
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g082580 0.5kb upstream 0.5kb upstream 2245 true chr2: 34654413-34656657 Medicago truncatula
Medtr2g082580 0.5kb upstream 0.5kb upstream 500 false chr2: 34656158-34656657 Medicago truncatula
Medtr2g082580 0.5kb downstream 0.5kb downstream 2245 true chr2: 34653913-34656157 Medicago truncatula
Medtr2g082580 0.5kb downstream 0.5kb downstream 500 false chr2: 34653913-34654412 Medicago truncatula
Medtr2g082580 1.0kb upstream 1.0kb upstream 2745 true chr2: 34654413-34657157 Medicago truncatula
Medtr2g082580 1.0kb upstream 1.0kb upstream 1000 false chr2: 34656158-34657157 Medicago truncatula
Medtr2g082580 1.0kb downstream 1.0kb downstream 2745 true chr2: 34653413-34656157 Medicago truncatula
Medtr2g082580 1.0kb downstream 1.0kb downstream 1000 false chr2: 34653413-34654412 Medicago truncatula
Medtr2g082580 2.0kb upstream 2.0kb upstream 3745 true chr2: 34654413-34658157 Medicago truncatula
Medtr2g082580 2.0kb upstream 2.0kb upstream 2000 false chr2: 34656158-34658157 Medicago truncatula
Medtr2g082580 2.0kb downstream 2.0kb downstream 3745 true chr2: 34652413-34656157 Medicago truncatula
Medtr2g082580 2.0kb downstream 2.0kb downstream 2000 false chr2: 34652413-34654412 Medicago truncatula
Medtr2g082580 5.0kb upstream 5.0kb upstream 6745 true chr2: 34654413-34661157 Medicago truncatula
Medtr2g082580 5.0kb upstream 5.0kb upstream 5000 false chr2: 34656158-34661157 Medicago truncatula
Medtr2g082580 5.0kb downstream 5.0kb downstream 6745 true chr2: 34649413-34656157 Medicago truncatula
Medtr2g082580 5.0kb downstream 5.0kb downstream 5000 false chr2: 34649413-34654412 Medicago truncatula
Medtr2g082580 10.0kb upstream 10.0kb upstream 11745 true chr2: 34654413-34666157 Medicago truncatula
Medtr2g082580 10.0kb upstream 10.0kb upstream 10000 false chr2: 34656158-34666157 Medicago truncatula
Medtr2g082580 10.0kb downstream 10.0kb downstream 11745 true chr2: 34644413-34656157 Medicago truncatula
Medtr2g082580 10.0kb downstream 10.0kb downstream 10000 false chr2: 34644413-34654412 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306753 5265 Fabidae View MSA
124061827 5270 Rosid View MSA
123739872 5271 Pentapetalae View MSA
122789340 5272 Eudicot View MSA
122046356 5273 Angiosperm View MSA
121310593 5274 Embryophyte View MSA
123348038 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 28.983     High  
cufflinks 35.596     High  
cufflinks 0.54        
cufflinks 56.668     High High
cufflinks 0.21        
cufflinks 0.309        
cufflinks 33.763     High  
cufflinks 0.516        

0 Strain