Gene : Medtr2g082090 M. truncatula Mt4.0v1
Defline:  (1 of 67) PF03514 - GRAS domain family (GRAS) Description:  GRAS family transcription factor
Genomic Order:  4304 Name:  ? Medtr2g082090
Secondary Identifier:  ? PAC:31063647
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g082090 0.5kb upstream 0.5kb upstream 3727 true chr2: 34496389-34500115 Medicago truncatula
Medtr2g082090 0.5kb upstream 0.5kb upstream 500 false chr2: 34499616-34500115 Medicago truncatula
Medtr2g082090 0.5kb downstream 0.5kb downstream 3727 true chr2: 34495889-34499615 Medicago truncatula
Medtr2g082090 0.5kb downstream 0.5kb downstream 500 false chr2: 34495889-34496388 Medicago truncatula
Medtr2g082090 1.0kb upstream 1.0kb upstream 4227 true chr2: 34496389-34500615 Medicago truncatula
Medtr2g082090 1.0kb upstream 1.0kb upstream 1000 false chr2: 34499616-34500615 Medicago truncatula
Medtr2g082090 1.0kb downstream 1.0kb downstream 4227 true chr2: 34495389-34499615 Medicago truncatula
Medtr2g082090 1.0kb downstream 1.0kb downstream 1000 false chr2: 34495389-34496388 Medicago truncatula
Medtr2g082090 2.0kb upstream 2.0kb upstream 5227 true chr2: 34496389-34501615 Medicago truncatula
Medtr2g082090 2.0kb upstream 2.0kb upstream 2000 false chr2: 34499616-34501615 Medicago truncatula
Medtr2g082090 2.0kb downstream 2.0kb downstream 5227 true chr2: 34494389-34499615 Medicago truncatula
Medtr2g082090 2.0kb downstream 2.0kb downstream 2000 false chr2: 34494389-34496388 Medicago truncatula
Medtr2g082090 5.0kb upstream 5.0kb upstream 8227 true chr2: 34496389-34504615 Medicago truncatula
Medtr2g082090 5.0kb upstream 5.0kb upstream 5000 false chr2: 34499616-34504615 Medicago truncatula
Medtr2g082090 5.0kb downstream 5.0kb downstream 8227 true chr2: 34491389-34499615 Medicago truncatula
Medtr2g082090 5.0kb downstream 5.0kb downstream 5000 false chr2: 34491389-34496388 Medicago truncatula
Medtr2g082090 10.0kb upstream 10.0kb upstream 13227 true chr2: 34496389-34509615 Medicago truncatula
Medtr2g082090 10.0kb upstream 10.0kb upstream 10000 false chr2: 34499616-34509615 Medicago truncatula
Medtr2g082090 10.0kb downstream 10.0kb downstream 13227 true chr2: 34486389-34499615 Medicago truncatula
Medtr2g082090 10.0kb downstream 10.0kb downstream 10000 false chr2: 34486389-34496388 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305990 5265 Fabidae View MSA
124070191 5270 Rosid View MSA
123743209 5271 Pentapetalae View MSA
122794651 5272 Eudicot View MSA
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.678     High High
cufflinks 8.494       Low
cufflinks 23.329     High  
cufflinks 17.441     High  
cufflinks 9.346        
cufflinks 10.935     High  
cufflinks 51.818     High High
cufflinks 11.24     High  
cufflinks 62.103     High High

0 Strain