Gene : Medtr2g083220 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Description:  Ypt/Rab-GAP domain of gyp1p superfamily protein
Genomic Order:  4360 Name:  ? Medtr2g083220
Secondary Identifier:  ? PAC:31062491
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g083220 0.5kb upstream 0.5kb upstream 6363 true chr2: 34938150-34944512 Medicago truncatula
Medtr2g083220 0.5kb upstream 0.5kb upstream 500 false chr2: 34944013-34944512 Medicago truncatula
Medtr2g083220 0.5kb downstream 0.5kb downstream 6363 true chr2: 34937650-34944012 Medicago truncatula
Medtr2g083220 0.5kb downstream 0.5kb downstream 500 false chr2: 34937650-34938149 Medicago truncatula
Medtr2g083220 1.0kb upstream 1.0kb upstream 6863 true chr2: 34938150-34945012 Medicago truncatula
Medtr2g083220 1.0kb upstream 1.0kb upstream 1000 false chr2: 34944013-34945012 Medicago truncatula
Medtr2g083220 1.0kb downstream 1.0kb downstream 6863 true chr2: 34937150-34944012 Medicago truncatula
Medtr2g083220 1.0kb downstream 1.0kb downstream 1000 false chr2: 34937150-34938149 Medicago truncatula
Medtr2g083220 2.0kb upstream 2.0kb upstream 7863 true chr2: 34938150-34946012 Medicago truncatula
Medtr2g083220 2.0kb upstream 2.0kb upstream 2000 false chr2: 34944013-34946012 Medicago truncatula
Medtr2g083220 2.0kb downstream 2.0kb downstream 7863 true chr2: 34936150-34944012 Medicago truncatula
Medtr2g083220 2.0kb downstream 2.0kb downstream 2000 false chr2: 34936150-34938149 Medicago truncatula
Medtr2g083220 5.0kb upstream 5.0kb upstream 10863 true chr2: 34938150-34949012 Medicago truncatula
Medtr2g083220 5.0kb upstream 5.0kb upstream 5000 false chr2: 34944013-34949012 Medicago truncatula
Medtr2g083220 5.0kb downstream 5.0kb downstream 10863 true chr2: 34933150-34944012 Medicago truncatula
Medtr2g083220 5.0kb downstream 5.0kb downstream 5000 false chr2: 34933150-34938149 Medicago truncatula
Medtr2g083220 10.0kb upstream 10.0kb upstream 15863 true chr2: 34938150-34954012 Medicago truncatula
Medtr2g083220 10.0kb upstream 10.0kb upstream 10000 false chr2: 34944013-34954012 Medicago truncatula
Medtr2g083220 10.0kb downstream 10.0kb downstream 15863 true chr2: 34928150-34944012 Medicago truncatula
Medtr2g083220 10.0kb downstream 10.0kb downstream 10000 false chr2: 34928150-34938149 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314128 5265 Fabidae View MSA
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.036        
cufflinks 6.755        
cufflinks 8.229        
cufflinks 2.09       Low
cufflinks 6.297        
cufflinks 3.387        
cufflinks 5.515        
cufflinks 6.43        
cufflinks 2.522       Low

0 Strain