Gene : Medtr2g083200 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13270 - PROTEIN C20ORF116-RELATED Description:  DDRGK domain protein
Genomic Order:  4358 Name:  ? Medtr2g083200
Secondary Identifier:  ? PAC:31066858
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g083200 0.5kb upstream 0.5kb upstream 7231 true chr2: 34925748-34932978 Medicago truncatula
Medtr2g083200 0.5kb upstream 0.5kb upstream 500 false chr2: 34925748-34926247 Medicago truncatula
Medtr2g083200 0.5kb downstream 0.5kb downstream 7231 true chr2: 34926248-34933478 Medicago truncatula
Medtr2g083200 0.5kb downstream 0.5kb downstream 500 false chr2: 34932979-34933478 Medicago truncatula
Medtr2g083200 1.0kb upstream 1.0kb upstream 7731 true chr2: 34925248-34932978 Medicago truncatula
Medtr2g083200 1.0kb upstream 1.0kb upstream 1000 false chr2: 34925248-34926247 Medicago truncatula
Medtr2g083200 1.0kb downstream 1.0kb downstream 7731 true chr2: 34926248-34933978 Medicago truncatula
Medtr2g083200 1.0kb downstream 1.0kb downstream 1000 false chr2: 34932979-34933978 Medicago truncatula
Medtr2g083200 2.0kb upstream 2.0kb upstream 8731 true chr2: 34924248-34932978 Medicago truncatula
Medtr2g083200 2.0kb upstream 2.0kb upstream 2000 false chr2: 34924248-34926247 Medicago truncatula
Medtr2g083200 2.0kb downstream 2.0kb downstream 8731 true chr2: 34926248-34934978 Medicago truncatula
Medtr2g083200 2.0kb downstream 2.0kb downstream 2000 false chr2: 34932979-34934978 Medicago truncatula
Medtr2g083200 5.0kb upstream 5.0kb upstream 11731 true chr2: 34921248-34932978 Medicago truncatula
Medtr2g083200 5.0kb upstream 5.0kb upstream 5000 false chr2: 34921248-34926247 Medicago truncatula
Medtr2g083200 5.0kb downstream 5.0kb downstream 11731 true chr2: 34926248-34937978 Medicago truncatula
Medtr2g083200 5.0kb downstream 5.0kb downstream 5000 false chr2: 34932979-34937978 Medicago truncatula
Medtr2g083200 10.0kb upstream 10.0kb upstream 16731 true chr2: 34916248-34932978 Medicago truncatula
Medtr2g083200 10.0kb upstream 10.0kb upstream 10000 false chr2: 34916248-34926247 Medicago truncatula
Medtr2g083200 10.0kb downstream 10.0kb downstream 16731 true chr2: 34926248-34942978 Medicago truncatula
Medtr2g083200 10.0kb downstream 10.0kb downstream 10000 false chr2: 34932979-34942978 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299765 5265 Fabidae View MSA
124064342 5270 Rosid View MSA
123740748 5271 Pentapetalae View MSA
122787568 5272 Eudicot View MSA
122042845 5273 Angiosperm View MSA
121345530 5274 Embryophyte View MSA
123425622 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.159        
cufflinks 4.46        
cufflinks 4.929        
cufflinks 1.801       Low
cufflinks 4.743        
cufflinks 1.332       Low
cufflinks 3.732        
cufflinks 4.729        
cufflinks 2.153        

0 Strain