Gene : Medtr2g083910 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Description:  DUF1685 family protein
Genomic Order:  4410 Name:  ? Medtr2g083910
Secondary Identifier:  ? PAC:31068547
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g083910 0.5kb upstream 0.5kb upstream 2378 true chr2: 35218311-35220688 Medicago truncatula
Medtr2g083910 0.5kb upstream 0.5kb upstream 500 false chr2: 35218311-35218810 Medicago truncatula
Medtr2g083910 0.5kb downstream 0.5kb downstream 2378 true chr2: 35218811-35221188 Medicago truncatula
Medtr2g083910 0.5kb downstream 0.5kb downstream 500 false chr2: 35220689-35221188 Medicago truncatula
Medtr2g083910 1.0kb upstream 1.0kb upstream 2878 true chr2: 35217811-35220688 Medicago truncatula
Medtr2g083910 1.0kb upstream 1.0kb upstream 1000 false chr2: 35217811-35218810 Medicago truncatula
Medtr2g083910 1.0kb downstream 1.0kb downstream 2878 true chr2: 35218811-35221688 Medicago truncatula
Medtr2g083910 1.0kb downstream 1.0kb downstream 1000 false chr2: 35220689-35221688 Medicago truncatula
Medtr2g083910 2.0kb upstream 2.0kb upstream 3878 true chr2: 35216811-35220688 Medicago truncatula
Medtr2g083910 2.0kb upstream 2.0kb upstream 2000 false chr2: 35216811-35218810 Medicago truncatula
Medtr2g083910 2.0kb downstream 2.0kb downstream 3878 true chr2: 35218811-35222688 Medicago truncatula
Medtr2g083910 2.0kb downstream 2.0kb downstream 2000 false chr2: 35220689-35222688 Medicago truncatula
Medtr2g083910 5.0kb upstream 5.0kb upstream 6878 true chr2: 35213811-35220688 Medicago truncatula
Medtr2g083910 5.0kb upstream 5.0kb upstream 5000 false chr2: 35213811-35218810 Medicago truncatula
Medtr2g083910 5.0kb downstream 5.0kb downstream 6878 true chr2: 35218811-35225688 Medicago truncatula
Medtr2g083910 5.0kb downstream 5.0kb downstream 5000 false chr2: 35220689-35225688 Medicago truncatula
Medtr2g083910 10.0kb upstream 10.0kb upstream 11878 true chr2: 35208811-35220688 Medicago truncatula
Medtr2g083910 10.0kb upstream 10.0kb upstream 10000 false chr2: 35208811-35218810 Medicago truncatula
Medtr2g083910 10.0kb downstream 10.0kb downstream 11878 true chr2: 35218811-35230688 Medicago truncatula
Medtr2g083910 10.0kb downstream 10.0kb downstream 10000 false chr2: 35220689-35230688 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297715 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.551        
cufflinks 0.279        
cufflinks 0.216       Low
cufflinks 2.178        
cufflinks 0.415        
cufflinks 7.047       High
cufflinks 3.473       High
cufflinks 0.235       Low
cufflinks 1.753        

0 Strain