Gene : Medtr2g084595 M. truncatula Mt4.0v1
Defline:  (1 of 32) PF03000 - NPH3 family (NPH3) Description:  phototropic-responsive NPH3 family protein
Genomic Order:  4486 Name:  ? Medtr2g084595
Secondary Identifier:  ? PAC:31065717
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g084595 0.5kb upstream 0.5kb upstream 4523 true chr2: 35801951-35806473 Medicago truncatula
Medtr2g084595 0.5kb upstream 0.5kb upstream 500 false chr2: 35801951-35802450 Medicago truncatula
Medtr2g084595 0.5kb downstream 0.5kb downstream 4523 true chr2: 35802451-35806973 Medicago truncatula
Medtr2g084595 0.5kb downstream 0.5kb downstream 500 false chr2: 35806474-35806973 Medicago truncatula
Medtr2g084595 1.0kb upstream 1.0kb upstream 5023 true chr2: 35801451-35806473 Medicago truncatula
Medtr2g084595 1.0kb upstream 1.0kb upstream 1000 false chr2: 35801451-35802450 Medicago truncatula
Medtr2g084595 1.0kb downstream 1.0kb downstream 5023 true chr2: 35802451-35807473 Medicago truncatula
Medtr2g084595 1.0kb downstream 1.0kb downstream 1000 false chr2: 35806474-35807473 Medicago truncatula
Medtr2g084595 2.0kb upstream 2.0kb upstream 6023 true chr2: 35800451-35806473 Medicago truncatula
Medtr2g084595 2.0kb upstream 2.0kb upstream 2000 false chr2: 35800451-35802450 Medicago truncatula
Medtr2g084595 2.0kb downstream 2.0kb downstream 6023 true chr2: 35802451-35808473 Medicago truncatula
Medtr2g084595 2.0kb downstream 2.0kb downstream 2000 false chr2: 35806474-35808473 Medicago truncatula
Medtr2g084595 5.0kb upstream 5.0kb upstream 9023 true chr2: 35797451-35806473 Medicago truncatula
Medtr2g084595 5.0kb upstream 5.0kb upstream 5000 false chr2: 35797451-35802450 Medicago truncatula
Medtr2g084595 5.0kb downstream 5.0kb downstream 9023 true chr2: 35802451-35811473 Medicago truncatula
Medtr2g084595 5.0kb downstream 5.0kb downstream 5000 false chr2: 35806474-35811473 Medicago truncatula
Medtr2g084595 10.0kb upstream 10.0kb upstream 14023 true chr2: 35792451-35806473 Medicago truncatula
Medtr2g084595 10.0kb upstream 10.0kb upstream 10000 false chr2: 35792451-35802450 Medicago truncatula
Medtr2g084595 10.0kb downstream 10.0kb downstream 14023 true chr2: 35802451-35816473 Medicago truncatula
Medtr2g084595 10.0kb downstream 10.0kb downstream 10000 false chr2: 35806474-35816473 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306491 5265 Fabidae View MSA
124061696 5270 Rosid View MSA
123736594 5271 Pentapetalae View MSA
122785807 5272 Eudicot View MSA
122045563 5273 Angiosperm View MSA
121310465 5274 Embryophyte View MSA
123347939 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.158       Low
cufflinks 1.632       High
cufflinks 1.218        
cufflinks 0.26        
cufflinks 1.655       High
cufflinks 0.189       Low
cufflinks 0.474        
cufflinks 1.188        
cufflinks 0.777        

0 Strain