Gene : Medtr2g085250 M. truncatula Mt4.0v1
Defline:  (1 of 30) PTHR11945:SF185 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL62 Description:  MADS-box transcription factor family protein
Genomic Order:  4157 Name:  ? Medtr2g085250
Secondary Identifier:  ? PAC:31066353
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g085250 0.5kb upstream 0.5kb upstream 1214 true chr2: 33245645-33246858 Medicago truncatula
Medtr2g085250 0.5kb upstream 0.5kb upstream 500 false chr2: 33245645-33246144 Medicago truncatula
Medtr2g085250 0.5kb downstream 0.5kb downstream 1214 true chr2: 33246145-33247358 Medicago truncatula
Medtr2g085250 0.5kb downstream 0.5kb downstream 500 false chr2: 33246859-33247358 Medicago truncatula
Medtr2g085250 1.0kb upstream 1.0kb upstream 1714 true chr2: 33245145-33246858 Medicago truncatula
Medtr2g085250 1.0kb upstream 1.0kb upstream 1000 false chr2: 33245145-33246144 Medicago truncatula
Medtr2g085250 1.0kb downstream 1.0kb downstream 1714 true chr2: 33246145-33247858 Medicago truncatula
Medtr2g085250 1.0kb downstream 1.0kb downstream 1000 false chr2: 33246859-33247858 Medicago truncatula
Medtr2g085250 2.0kb upstream 2.0kb upstream 2714 true chr2: 33244145-33246858 Medicago truncatula
Medtr2g085250 2.0kb upstream 2.0kb upstream 2000 false chr2: 33244145-33246144 Medicago truncatula
Medtr2g085250 2.0kb downstream 2.0kb downstream 2714 true chr2: 33246145-33248858 Medicago truncatula
Medtr2g085250 2.0kb downstream 2.0kb downstream 2000 false chr2: 33246859-33248858 Medicago truncatula
Medtr2g085250 5.0kb upstream 5.0kb upstream 5714 true chr2: 33241145-33246858 Medicago truncatula
Medtr2g085250 5.0kb upstream 5.0kb upstream 5000 false chr2: 33241145-33246144 Medicago truncatula
Medtr2g085250 5.0kb downstream 5.0kb downstream 5714 true chr2: 33246145-33251858 Medicago truncatula
Medtr2g085250 5.0kb downstream 5.0kb downstream 5000 false chr2: 33246859-33251858 Medicago truncatula
Medtr2g085250 10.0kb upstream 10.0kb upstream 10714 true chr2: 33236145-33246858 Medicago truncatula
Medtr2g085250 10.0kb upstream 10.0kb upstream 10000 false chr2: 33236145-33246144 Medicago truncatula
Medtr2g085250 10.0kb downstream 10.0kb downstream 10714 true chr2: 33246145-33256858 Medicago truncatula
Medtr2g085250 10.0kb downstream 10.0kb downstream 10000 false chr2: 33246859-33256858 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312588 5265 Fabidae View MSA
124069913 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain