Gene : Medtr2g072180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10774:SF80 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Description:  calcium-dependent lipid-binding domain protein
Genomic Order:  3795 Name:  ? Medtr2g072180
Secondary Identifier:  ? PAC:31065418
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g072180 0.5kb upstream 0.5kb upstream 8109 true chr2: 30303509-30311617 Medicago truncatula
Medtr2g072180 0.5kb upstream 0.5kb upstream 500 false chr2: 30311118-30311617 Medicago truncatula
Medtr2g072180 0.5kb downstream 0.5kb downstream 8109 true chr2: 30303009-30311117 Medicago truncatula
Medtr2g072180 0.5kb downstream 0.5kb downstream 500 false chr2: 30303009-30303508 Medicago truncatula
Medtr2g072180 1.0kb upstream 1.0kb upstream 8609 true chr2: 30303509-30312117 Medicago truncatula
Medtr2g072180 1.0kb upstream 1.0kb upstream 1000 false chr2: 30311118-30312117 Medicago truncatula
Medtr2g072180 1.0kb downstream 1.0kb downstream 8609 true chr2: 30302509-30311117 Medicago truncatula
Medtr2g072180 1.0kb downstream 1.0kb downstream 1000 false chr2: 30302509-30303508 Medicago truncatula
Medtr2g072180 2.0kb upstream 2.0kb upstream 9609 true chr2: 30303509-30313117 Medicago truncatula
Medtr2g072180 2.0kb upstream 2.0kb upstream 2000 false chr2: 30311118-30313117 Medicago truncatula
Medtr2g072180 2.0kb downstream 2.0kb downstream 9609 true chr2: 30301509-30311117 Medicago truncatula
Medtr2g072180 2.0kb downstream 2.0kb downstream 2000 false chr2: 30301509-30303508 Medicago truncatula
Medtr2g072180 5.0kb upstream 5.0kb upstream 12609 true chr2: 30303509-30316117 Medicago truncatula
Medtr2g072180 5.0kb upstream 5.0kb upstream 5000 false chr2: 30311118-30316117 Medicago truncatula
Medtr2g072180 5.0kb downstream 5.0kb downstream 12609 true chr2: 30298509-30311117 Medicago truncatula
Medtr2g072180 5.0kb downstream 5.0kb downstream 5000 false chr2: 30298509-30303508 Medicago truncatula
Medtr2g072180 10.0kb upstream 10.0kb upstream 17609 true chr2: 30303509-30321117 Medicago truncatula
Medtr2g072180 10.0kb upstream 10.0kb upstream 10000 false chr2: 30311118-30321117 Medicago truncatula
Medtr2g072180 10.0kb downstream 10.0kb downstream 17609 true chr2: 30293509-30311117 Medicago truncatula
Medtr2g072180 10.0kb downstream 10.0kb downstream 10000 false chr2: 30293509-30303508 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312544 5265 Fabidae View MSA
124066710 5270 Rosid View MSA
123745986 5271 Pentapetalae View MSA
122787732 5272 Eudicot View MSA
122045584 5273 Angiosperm View MSA
121350253 5274 Embryophyte View MSA
123426647 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.733        
cufflinks 4.741        
cufflinks 10.258     High High
cufflinks 2.627       Low
cufflinks 4.331        
cufflinks 3.816        
cufflinks 8.051        
cufflinks 4.948        
cufflinks 10.252       High

0 Strain