Gene : Medtr2g071620 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Description:  ubiquitin carboxy-terminal hydrolase
Genomic Order:  3752 Name:  ? Medtr2g071620
Secondary Identifier:  ? PAC:31068951
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g071620 0.5kb upstream 0.5kb upstream 9426 true chr2: 29928682-29938107 Medicago truncatula
Medtr2g071620 0.5kb upstream 0.5kb upstream 500 false chr2: 29937608-29938107 Medicago truncatula
Medtr2g071620 0.5kb downstream 0.5kb downstream 9426 true chr2: 29928182-29937607 Medicago truncatula
Medtr2g071620 0.5kb downstream 0.5kb downstream 500 false chr2: 29928182-29928681 Medicago truncatula
Medtr2g071620 1.0kb upstream 1.0kb upstream 9926 true chr2: 29928682-29938607 Medicago truncatula
Medtr2g071620 1.0kb upstream 1.0kb upstream 1000 false chr2: 29937608-29938607 Medicago truncatula
Medtr2g071620 1.0kb downstream 1.0kb downstream 9926 true chr2: 29927682-29937607 Medicago truncatula
Medtr2g071620 1.0kb downstream 1.0kb downstream 1000 false chr2: 29927682-29928681 Medicago truncatula
Medtr2g071620 2.0kb upstream 2.0kb upstream 10926 true chr2: 29928682-29939607 Medicago truncatula
Medtr2g071620 2.0kb upstream 2.0kb upstream 2000 false chr2: 29937608-29939607 Medicago truncatula
Medtr2g071620 2.0kb downstream 2.0kb downstream 10926 true chr2: 29926682-29937607 Medicago truncatula
Medtr2g071620 2.0kb downstream 2.0kb downstream 2000 false chr2: 29926682-29928681 Medicago truncatula
Medtr2g071620 5.0kb upstream 5.0kb upstream 13926 true chr2: 29928682-29942607 Medicago truncatula
Medtr2g071620 5.0kb upstream 5.0kb upstream 5000 false chr2: 29937608-29942607 Medicago truncatula
Medtr2g071620 5.0kb downstream 5.0kb downstream 13926 true chr2: 29923682-29937607 Medicago truncatula
Medtr2g071620 5.0kb downstream 5.0kb downstream 5000 false chr2: 29923682-29928681 Medicago truncatula
Medtr2g071620 10.0kb upstream 10.0kb upstream 18926 true chr2: 29928682-29947607 Medicago truncatula
Medtr2g071620 10.0kb upstream 10.0kb upstream 10000 false chr2: 29937608-29947607 Medicago truncatula
Medtr2g071620 10.0kb downstream 10.0kb downstream 18926 true chr2: 29918682-29937607 Medicago truncatula
Medtr2g071620 10.0kb downstream 10.0kb downstream 10000 false chr2: 29918682-29928681 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299615 5265 Fabidae View MSA
124069029 5270 Rosid View MSA
123741406 5271 Pentapetalae View MSA
122770044 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216        
cufflinks 0.994        
cufflinks 0.882        
cufflinks 0.074       Low
cufflinks 1.239       High
cufflinks 0.051     Low Low
cufflinks 0.272        
cufflinks 0.851        
cufflinks 0.259        

0 Strain