Gene : Medtr2g072500 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31044:SF19 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED Description:  glucan endo-1,3-beta-glucosidase-like protein
Genomic Order:  3811 Name:  ? Medtr2g072500
Secondary Identifier:  ? PAC:31067001
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g072500 0.5kb upstream 0.5kb upstream 1161 true chr2: 30528716-30529876 Medicago truncatula
Medtr2g072500 0.5kb upstream 0.5kb upstream 500 false chr2: 30529377-30529876 Medicago truncatula
Medtr2g072500 0.5kb downstream 0.5kb downstream 1161 true chr2: 30528216-30529376 Medicago truncatula
Medtr2g072500 0.5kb downstream 0.5kb downstream 500 false chr2: 30528216-30528715 Medicago truncatula
Medtr2g072500 1.0kb upstream 1.0kb upstream 1661 true chr2: 30528716-30530376 Medicago truncatula
Medtr2g072500 1.0kb upstream 1.0kb upstream 1000 false chr2: 30529377-30530376 Medicago truncatula
Medtr2g072500 1.0kb downstream 1.0kb downstream 1661 true chr2: 30527716-30529376 Medicago truncatula
Medtr2g072500 1.0kb downstream 1.0kb downstream 1000 false chr2: 30527716-30528715 Medicago truncatula
Medtr2g072500 2.0kb upstream 2.0kb upstream 2661 true chr2: 30528716-30531376 Medicago truncatula
Medtr2g072500 2.0kb upstream 2.0kb upstream 2000 false chr2: 30529377-30531376 Medicago truncatula
Medtr2g072500 2.0kb downstream 2.0kb downstream 2661 true chr2: 30526716-30529376 Medicago truncatula
Medtr2g072500 2.0kb downstream 2.0kb downstream 2000 false chr2: 30526716-30528715 Medicago truncatula
Medtr2g072500 5.0kb upstream 5.0kb upstream 5661 true chr2: 30528716-30534376 Medicago truncatula
Medtr2g072500 5.0kb upstream 5.0kb upstream 5000 false chr2: 30529377-30534376 Medicago truncatula
Medtr2g072500 5.0kb downstream 5.0kb downstream 5661 true chr2: 30523716-30529376 Medicago truncatula
Medtr2g072500 5.0kb downstream 5.0kb downstream 5000 false chr2: 30523716-30528715 Medicago truncatula
Medtr2g072500 10.0kb upstream 10.0kb upstream 10661 true chr2: 30528716-30539376 Medicago truncatula
Medtr2g072500 10.0kb upstream 10.0kb upstream 10000 false chr2: 30529377-30539376 Medicago truncatula
Medtr2g072500 10.0kb downstream 10.0kb downstream 10661 true chr2: 30518716-30529376 Medicago truncatula
Medtr2g072500 10.0kb downstream 10.0kb downstream 10000 false chr2: 30518716-30528715 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304856 5265 Fabidae View MSA
124067142 5270 Rosid View MSA
123750670 5271 Pentapetalae View MSA
122789328 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.525       Low
cufflinks 2.344        
cufflinks 1.668        
cufflinks 4.458        
cufflinks 2.89        
cufflinks 2.74        
cufflinks 4.263        
cufflinks 2.746        
cufflinks 8.229       High

0 Strain