Gene : Medtr2g076680 M. truncatula Mt4.0v1

Defline:  (1 of 2) 2.4.1.259 - Dolichyl-P-Man:Man(6)GlcNAc(2)-PP-dolichol alpha-1,2-mannosyltransferase / Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase Description:  alpha-1,2-mannosyltransferase Alg9
Genomic Order:  4020 Name:  ? Medtr2g076680
Secondary Identifier:  ? PAC:31067617

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g076680 0.5kb upstream 0.5kb upstream 8292 true chr2: 32101812-32110103 Medicago truncatula
Medtr2g076680 0.5kb upstream 0.5kb upstream 500 false chr2: 32101812-32102311 Medicago truncatula
Medtr2g076680 0.5kb downstream 0.5kb downstream 8292 true chr2: 32102312-32110603 Medicago truncatula
Medtr2g076680 0.5kb downstream 0.5kb downstream 500 false chr2: 32110104-32110603 Medicago truncatula
Medtr2g076680 1.0kb upstream 1.0kb upstream 8792 true chr2: 32101312-32110103 Medicago truncatula
Medtr2g076680 1.0kb upstream 1.0kb upstream 1000 false chr2: 32101312-32102311 Medicago truncatula
Medtr2g076680 1.0kb downstream 1.0kb downstream 8792 true chr2: 32102312-32111103 Medicago truncatula
Medtr2g076680 1.0kb downstream 1.0kb downstream 1000 false chr2: 32110104-32111103 Medicago truncatula
Medtr2g076680 2.0kb upstream 2.0kb upstream 9792 true chr2: 32100312-32110103 Medicago truncatula
Medtr2g076680 2.0kb upstream 2.0kb upstream 2000 false chr2: 32100312-32102311 Medicago truncatula
Medtr2g076680 2.0kb downstream 2.0kb downstream 9792 true chr2: 32102312-32112103 Medicago truncatula
Medtr2g076680 2.0kb downstream 2.0kb downstream 2000 false chr2: 32110104-32112103 Medicago truncatula
Medtr2g076680 5.0kb upstream 5.0kb upstream 12792 true chr2: 32097312-32110103 Medicago truncatula
Medtr2g076680 5.0kb upstream 5.0kb upstream 5000 false chr2: 32097312-32102311 Medicago truncatula
Medtr2g076680 5.0kb downstream 5.0kb downstream 12792 true chr2: 32102312-32115103 Medicago truncatula
Medtr2g076680 5.0kb downstream 5.0kb downstream 5000 false chr2: 32110104-32115103 Medicago truncatula
Medtr2g076680 10.0kb upstream 10.0kb upstream 17792 true chr2: 32092312-32110103 Medicago truncatula
Medtr2g076680 10.0kb upstream 10.0kb upstream 10000 false chr2: 32092312-32102311 Medicago truncatula
Medtr2g076680 10.0kb downstream 10.0kb downstream 17792 true chr2: 32102312-32120103 Medicago truncatula
Medtr2g076680 10.0kb downstream 10.0kb downstream 10000 false chr2: 32110104-32120103 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301391 5265 Fabidae View MSA
124063894 5270 Rosid View MSA
123739180 5271 Pentapetalae View MSA
122792899 5272 Eudicot View MSA
122047360 5273 Angiosperm View MSA
121346060 5274 Embryophyte View MSA
123423967 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.517        
cufflinks 0.78        
cufflinks 0.741        
cufflinks 0.902        
cufflinks 1.385       High
cufflinks 0.29       Low
cufflinks 0.646        
cufflinks 0.597        
cufflinks 0.783        

0 Strain