Gene : Medtr2g076330 M. truncatula Mt4.0v1

Description:  hypothetical protein Genomic Order:  4003
Name:  ? Medtr2g076330 Secondary Identifier:  ? PAC:31069157

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g076330 0.5kb upstream 0.5kb upstream 5530 true chr2: 31976396-31981925 Medicago truncatula
Medtr2g076330 0.5kb upstream 0.5kb upstream 500 false chr2: 31981426-31981925 Medicago truncatula
Medtr2g076330 0.5kb downstream 0.5kb downstream 5530 true chr2: 31975896-31981425 Medicago truncatula
Medtr2g076330 0.5kb downstream 0.5kb downstream 500 false chr2: 31975896-31976395 Medicago truncatula
Medtr2g076330 1.0kb upstream 1.0kb upstream 6030 true chr2: 31976396-31982425 Medicago truncatula
Medtr2g076330 1.0kb upstream 1.0kb upstream 1000 false chr2: 31981426-31982425 Medicago truncatula
Medtr2g076330 1.0kb downstream 1.0kb downstream 6030 true chr2: 31975396-31981425 Medicago truncatula
Medtr2g076330 1.0kb downstream 1.0kb downstream 1000 false chr2: 31975396-31976395 Medicago truncatula
Medtr2g076330 2.0kb upstream 2.0kb upstream 7030 true chr2: 31976396-31983425 Medicago truncatula
Medtr2g076330 2.0kb upstream 2.0kb upstream 2000 false chr2: 31981426-31983425 Medicago truncatula
Medtr2g076330 2.0kb downstream 2.0kb downstream 7030 true chr2: 31974396-31981425 Medicago truncatula
Medtr2g076330 2.0kb downstream 2.0kb downstream 2000 false chr2: 31974396-31976395 Medicago truncatula
Medtr2g076330 5.0kb upstream 5.0kb upstream 10030 true chr2: 31976396-31986425 Medicago truncatula
Medtr2g076330 5.0kb upstream 5.0kb upstream 5000 false chr2: 31981426-31986425 Medicago truncatula
Medtr2g076330 5.0kb downstream 5.0kb downstream 10030 true chr2: 31971396-31981425 Medicago truncatula
Medtr2g076330 5.0kb downstream 5.0kb downstream 5000 false chr2: 31971396-31976395 Medicago truncatula
Medtr2g076330 10.0kb upstream 10.0kb upstream 15030 true chr2: 31976396-31991425 Medicago truncatula
Medtr2g076330 10.0kb upstream 10.0kb upstream 10000 false chr2: 31981426-31991425 Medicago truncatula
Medtr2g076330 10.0kb downstream 10.0kb downstream 15030 true chr2: 31966396-31981425 Medicago truncatula
Medtr2g076330 10.0kb downstream 10.0kb downstream 10000 false chr2: 31966396-31976395 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297314 5265 Fabidae View MSA
124060665 5270 Rosid View MSA
123748059 5271 Pentapetalae View MSA
122790792 5272 Eudicot View MSA
122048556 5273 Angiosperm View MSA
121311018 5274 Embryophyte View MSA
123348376 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.817        
cufflinks 0.502        
cufflinks 0.741        
cufflinks 0.307        
cufflinks 1.176       High
cufflinks 0.163       Low
cufflinks 0.61        
cufflinks 0.617        
cufflinks 0.612        

0 Strain