Gene : Medtr2g076140 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22952:SF195 - DNA-BINDING PROTEIN-LIKE PROTEIN Description:  transcription factor TGA5-like protein
Genomic Order:  3990 Name:  ? Medtr2g076140
Secondary Identifier:  ? PAC:31062822
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g076140 0.5kb upstream 0.5kb upstream 2358 true chr2: 31904326-31906683 Medicago truncatula
Medtr2g076140 0.5kb upstream 0.5kb upstream 500 false chr2: 31904326-31904825 Medicago truncatula
Medtr2g076140 0.5kb downstream 0.5kb downstream 2358 true chr2: 31904826-31907183 Medicago truncatula
Medtr2g076140 0.5kb downstream 0.5kb downstream 500 false chr2: 31906684-31907183 Medicago truncatula
Medtr2g076140 1.0kb upstream 1.0kb upstream 2858 true chr2: 31903826-31906683 Medicago truncatula
Medtr2g076140 1.0kb upstream 1.0kb upstream 1000 false chr2: 31903826-31904825 Medicago truncatula
Medtr2g076140 1.0kb downstream 1.0kb downstream 2858 true chr2: 31904826-31907683 Medicago truncatula
Medtr2g076140 1.0kb downstream 1.0kb downstream 1000 false chr2: 31906684-31907683 Medicago truncatula
Medtr2g076140 2.0kb upstream 2.0kb upstream 3858 true chr2: 31902826-31906683 Medicago truncatula
Medtr2g076140 2.0kb upstream 2.0kb upstream 2000 false chr2: 31902826-31904825 Medicago truncatula
Medtr2g076140 2.0kb downstream 2.0kb downstream 3858 true chr2: 31904826-31908683 Medicago truncatula
Medtr2g076140 2.0kb downstream 2.0kb downstream 2000 false chr2: 31906684-31908683 Medicago truncatula
Medtr2g076140 5.0kb upstream 5.0kb upstream 6858 true chr2: 31899826-31906683 Medicago truncatula
Medtr2g076140 5.0kb upstream 5.0kb upstream 5000 false chr2: 31899826-31904825 Medicago truncatula
Medtr2g076140 5.0kb downstream 5.0kb downstream 6858 true chr2: 31904826-31911683 Medicago truncatula
Medtr2g076140 5.0kb downstream 5.0kb downstream 5000 false chr2: 31906684-31911683 Medicago truncatula
Medtr2g076140 10.0kb upstream 10.0kb upstream 11858 true chr2: 31894826-31906683 Medicago truncatula
Medtr2g076140 10.0kb upstream 10.0kb upstream 10000 false chr2: 31894826-31904825 Medicago truncatula
Medtr2g076140 10.0kb downstream 10.0kb downstream 11858 true chr2: 31904826-31916683 Medicago truncatula
Medtr2g076140 10.0kb downstream 10.0kb downstream 10000 false chr2: 31906684-31916683 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307210 5265 Fabidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  

0 Strain