Gene : Medtr2g078060 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11019:SF100 - PROTEIN DJ-1 Description:  class I glutamine amidotransferase superfamily protein
Genomic Order:  4064 Name:  ? Medtr2g078060
Secondary Identifier:  ? PAC:31062816
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g078060 0.5kb upstream 0.5kb upstream 4471 true chr2: 32401134-32405604 Medicago truncatula
Medtr2g078060 0.5kb upstream 0.5kb upstream 500 false chr2: 32401134-32401633 Medicago truncatula
Medtr2g078060 0.5kb downstream 0.5kb downstream 4471 true chr2: 32401634-32406104 Medicago truncatula
Medtr2g078060 0.5kb downstream 0.5kb downstream 500 false chr2: 32405605-32406104 Medicago truncatula
Medtr2g078060 1.0kb upstream 1.0kb upstream 4971 true chr2: 32400634-32405604 Medicago truncatula
Medtr2g078060 1.0kb upstream 1.0kb upstream 1000 false chr2: 32400634-32401633 Medicago truncatula
Medtr2g078060 1.0kb downstream 1.0kb downstream 4971 true chr2: 32401634-32406604 Medicago truncatula
Medtr2g078060 1.0kb downstream 1.0kb downstream 1000 false chr2: 32405605-32406604 Medicago truncatula
Medtr2g078060 2.0kb upstream 2.0kb upstream 5971 true chr2: 32399634-32405604 Medicago truncatula
Medtr2g078060 2.0kb upstream 2.0kb upstream 2000 false chr2: 32399634-32401633 Medicago truncatula
Medtr2g078060 2.0kb downstream 2.0kb downstream 5971 true chr2: 32401634-32407604 Medicago truncatula
Medtr2g078060 2.0kb downstream 2.0kb downstream 2000 false chr2: 32405605-32407604 Medicago truncatula
Medtr2g078060 5.0kb upstream 5.0kb upstream 8971 true chr2: 32396634-32405604 Medicago truncatula
Medtr2g078060 5.0kb upstream 5.0kb upstream 5000 false chr2: 32396634-32401633 Medicago truncatula
Medtr2g078060 5.0kb downstream 5.0kb downstream 8971 true chr2: 32401634-32410604 Medicago truncatula
Medtr2g078060 5.0kb downstream 5.0kb downstream 5000 false chr2: 32405605-32410604 Medicago truncatula
Medtr2g078060 10.0kb upstream 10.0kb upstream 13971 true chr2: 32391634-32405604 Medicago truncatula
Medtr2g078060 10.0kb upstream 10.0kb upstream 10000 false chr2: 32391634-32401633 Medicago truncatula
Medtr2g078060 10.0kb downstream 10.0kb downstream 13971 true chr2: 32401634-32415604 Medicago truncatula
Medtr2g078060 10.0kb downstream 10.0kb downstream 10000 false chr2: 32405605-32415604 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303819 5265 Fabidae View MSA
124063705 5270 Rosid View MSA
123739735 5271 Pentapetalae View MSA
122788199 5272 Eudicot View MSA
122047245 5273 Angiosperm View MSA
121350648 5274 Embryophyte View MSA
123428584 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.133     High  
cufflinks 19.609     High  
cufflinks 15.039     High  
cufflinks 6.917        
cufflinks 15.623     High  
cufflinks 2.76       Low
cufflinks 5.87        
cufflinks 16.412     High  
cufflinks 15.55     High  

0 Strain