Gene : Medtr2g078670 M. truncatula Mt4.0v1
Defline:  (1 of 9) KOG3399 - Predicted Yippee-type zinc-binding protein Description:  yippee family zinc-binding protein, putative
Genomic Order:  4112 Name:  ? Medtr2g078670
Secondary Identifier:  ? PAC:31068396
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g078670 0.5kb upstream 0.5kb upstream 3661 true chr2: 32850679-32854339 Medicago truncatula
Medtr2g078670 0.5kb upstream 0.5kb upstream 500 false chr2: 32853840-32854339 Medicago truncatula
Medtr2g078670 0.5kb downstream 0.5kb downstream 3661 true chr2: 32850179-32853839 Medicago truncatula
Medtr2g078670 0.5kb downstream 0.5kb downstream 500 false chr2: 32850179-32850678 Medicago truncatula
Medtr2g078670 1.0kb upstream 1.0kb upstream 4161 true chr2: 32850679-32854839 Medicago truncatula
Medtr2g078670 1.0kb upstream 1.0kb upstream 1000 false chr2: 32853840-32854839 Medicago truncatula
Medtr2g078670 1.0kb downstream 1.0kb downstream 4161 true chr2: 32849679-32853839 Medicago truncatula
Medtr2g078670 1.0kb downstream 1.0kb downstream 1000 false chr2: 32849679-32850678 Medicago truncatula
Medtr2g078670 2.0kb upstream 2.0kb upstream 5161 true chr2: 32850679-32855839 Medicago truncatula
Medtr2g078670 2.0kb upstream 2.0kb upstream 2000 false chr2: 32853840-32855839 Medicago truncatula
Medtr2g078670 2.0kb downstream 2.0kb downstream 5161 true chr2: 32848679-32853839 Medicago truncatula
Medtr2g078670 2.0kb downstream 2.0kb downstream 2000 false chr2: 32848679-32850678 Medicago truncatula
Medtr2g078670 5.0kb upstream 5.0kb upstream 8161 true chr2: 32850679-32858839 Medicago truncatula
Medtr2g078670 5.0kb upstream 5.0kb upstream 5000 false chr2: 32853840-32858839 Medicago truncatula
Medtr2g078670 5.0kb downstream 5.0kb downstream 8161 true chr2: 32845679-32853839 Medicago truncatula
Medtr2g078670 5.0kb downstream 5.0kb downstream 5000 false chr2: 32845679-32850678 Medicago truncatula
Medtr2g078670 10.0kb upstream 10.0kb upstream 13161 true chr2: 32850679-32863839 Medicago truncatula
Medtr2g078670 10.0kb upstream 10.0kb upstream 10000 false chr2: 32853840-32863839 Medicago truncatula
Medtr2g078670 10.0kb downstream 10.0kb downstream 13161 true chr2: 32840679-32853839 Medicago truncatula
Medtr2g078670 10.0kb downstream 10.0kb downstream 10000 false chr2: 32840679-32850678 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041250 5273 Angiosperm View MSA
122304955 5265 Fabidae View MSA
124066251 5270 Rosid View MSA
123749273 5271 Pentapetalae View MSA
122792066 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121350900 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.041     Low Low
cufflinks 1.393       High
cufflinks 0.457        
cufflinks 0.678        
cufflinks 0.816        
cufflinks 0.205        
cufflinks 0.335        
cufflinks 1.13        
cufflinks 0.218        

0 Strain