Gene : Medtr2g078540 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF11282 - Protein of unknown function (DUF3082) (DUF3082) Description:  transmembrane protein, putative
Genomic Order:  4099 Name:  ? Medtr2g078540
Secondary Identifier:  ? PAC:31068804
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g078540 0.5kb upstream 0.5kb upstream 4126 true chr2: 32779136-32783261 Medicago truncatula
Medtr2g078540 0.5kb upstream 0.5kb upstream 500 false chr2: 32782762-32783261 Medicago truncatula
Medtr2g078540 0.5kb downstream 0.5kb downstream 4126 true chr2: 32778636-32782761 Medicago truncatula
Medtr2g078540 0.5kb downstream 0.5kb downstream 500 false chr2: 32778636-32779135 Medicago truncatula
Medtr2g078540 1.0kb upstream 1.0kb upstream 4626 true chr2: 32779136-32783761 Medicago truncatula
Medtr2g078540 1.0kb upstream 1.0kb upstream 1000 false chr2: 32782762-32783761 Medicago truncatula
Medtr2g078540 1.0kb downstream 1.0kb downstream 4626 true chr2: 32778136-32782761 Medicago truncatula
Medtr2g078540 1.0kb downstream 1.0kb downstream 1000 false chr2: 32778136-32779135 Medicago truncatula
Medtr2g078540 2.0kb upstream 2.0kb upstream 5626 true chr2: 32779136-32784761 Medicago truncatula
Medtr2g078540 2.0kb upstream 2.0kb upstream 2000 false chr2: 32782762-32784761 Medicago truncatula
Medtr2g078540 2.0kb downstream 2.0kb downstream 5626 true chr2: 32777136-32782761 Medicago truncatula
Medtr2g078540 2.0kb downstream 2.0kb downstream 2000 false chr2: 32777136-32779135 Medicago truncatula
Medtr2g078540 5.0kb upstream 5.0kb upstream 8626 true chr2: 32779136-32787761 Medicago truncatula
Medtr2g078540 5.0kb upstream 5.0kb upstream 5000 false chr2: 32782762-32787761 Medicago truncatula
Medtr2g078540 5.0kb downstream 5.0kb downstream 8626 true chr2: 32774136-32782761 Medicago truncatula
Medtr2g078540 5.0kb downstream 5.0kb downstream 5000 false chr2: 32774136-32779135 Medicago truncatula
Medtr2g078540 10.0kb upstream 10.0kb upstream 13626 true chr2: 32779136-32792761 Medicago truncatula
Medtr2g078540 10.0kb upstream 10.0kb upstream 10000 false chr2: 32782762-32792761 Medicago truncatula
Medtr2g078540 10.0kb downstream 10.0kb downstream 13626 true chr2: 32769136-32782761 Medicago truncatula
Medtr2g078540 10.0kb downstream 10.0kb downstream 10000 false chr2: 32769136-32779135 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305734 5265 Fabidae View MSA
124063883 5270 Rosid View MSA
123739511 5271 Pentapetalae View MSA
122786347 5272 Eudicot View MSA
122042637 5273 Angiosperm View MSA
121346194 5274 Embryophyte View MSA
123428138 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03     Low Low
cufflinks 2.703        
cufflinks 4.375        
cufflinks 0.286        
cufflinks 8.491       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.107        
cufflinks 3.455        
cufflinks 0.195        

0 Strain