Gene : Medtr2g078620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33785:SF1 - GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F4B12 Description:  hypothetical protein
Genomic Order:  4107 Name:  ? Medtr2g078620
Secondary Identifier:  ? PAC:31064403
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g078620 0.5kb upstream 0.5kb upstream 2627 true chr2: 32815804-32818430 Medicago truncatula
Medtr2g078620 0.5kb upstream 0.5kb upstream 500 false chr2: 32817931-32818430 Medicago truncatula
Medtr2g078620 0.5kb downstream 0.5kb downstream 2627 true chr2: 32815304-32817930 Medicago truncatula
Medtr2g078620 0.5kb downstream 0.5kb downstream 500 false chr2: 32815304-32815803 Medicago truncatula
Medtr2g078620 1.0kb upstream 1.0kb upstream 3127 true chr2: 32815804-32818930 Medicago truncatula
Medtr2g078620 1.0kb upstream 1.0kb upstream 1000 false chr2: 32817931-32818930 Medicago truncatula
Medtr2g078620 1.0kb downstream 1.0kb downstream 3127 true chr2: 32814804-32817930 Medicago truncatula
Medtr2g078620 1.0kb downstream 1.0kb downstream 1000 false chr2: 32814804-32815803 Medicago truncatula
Medtr2g078620 2.0kb upstream 2.0kb upstream 4127 true chr2: 32815804-32819930 Medicago truncatula
Medtr2g078620 2.0kb upstream 2.0kb upstream 2000 false chr2: 32817931-32819930 Medicago truncatula
Medtr2g078620 2.0kb downstream 2.0kb downstream 4127 true chr2: 32813804-32817930 Medicago truncatula
Medtr2g078620 2.0kb downstream 2.0kb downstream 2000 false chr2: 32813804-32815803 Medicago truncatula
Medtr2g078620 5.0kb upstream 5.0kb upstream 7127 true chr2: 32815804-32822930 Medicago truncatula
Medtr2g078620 5.0kb upstream 5.0kb upstream 5000 false chr2: 32817931-32822930 Medicago truncatula
Medtr2g078620 5.0kb downstream 5.0kb downstream 7127 true chr2: 32810804-32817930 Medicago truncatula
Medtr2g078620 5.0kb downstream 5.0kb downstream 5000 false chr2: 32810804-32815803 Medicago truncatula
Medtr2g078620 10.0kb upstream 10.0kb upstream 12127 true chr2: 32815804-32827930 Medicago truncatula
Medtr2g078620 10.0kb upstream 10.0kb upstream 10000 false chr2: 32817931-32827930 Medicago truncatula
Medtr2g078620 10.0kb downstream 10.0kb downstream 12127 true chr2: 32805804-32817930 Medicago truncatula
Medtr2g078620 10.0kb downstream 10.0kb downstream 10000 false chr2: 32805804-32815803 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301879 5265 Fabidae View MSA
124063782 5270 Rosid View MSA
123750914 5271 Pentapetalae View MSA
122795249 5272 Eudicot View MSA
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245       Low
cufflinks 13.448     High High
cufflinks 9.99     High  
cufflinks 0.822        
cufflinks 13.2     High High
cufflinks 1.824        
cufflinks 1.087        
cufflinks 10.011     High  
cufflinks 1.242        

0 Strain