Gene : Medtr2g079460 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  4179
Name:  ? Medtr2g079460 Secondary Identifier:  ? PAC:31062457
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g079460 0.5kb upstream 0.5kb upstream 5977 true chr2: 33443061-33449037 Medicago truncatula
Medtr2g079460 0.5kb upstream 0.5kb upstream 500 false chr2: 33443061-33443560 Medicago truncatula
Medtr2g079460 0.5kb downstream 0.5kb downstream 5977 true chr2: 33443561-33449537 Medicago truncatula
Medtr2g079460 0.5kb downstream 0.5kb downstream 500 false chr2: 33449038-33449537 Medicago truncatula
Medtr2g079460 1.0kb upstream 1.0kb upstream 6477 true chr2: 33442561-33449037 Medicago truncatula
Medtr2g079460 1.0kb upstream 1.0kb upstream 1000 false chr2: 33442561-33443560 Medicago truncatula
Medtr2g079460 1.0kb downstream 1.0kb downstream 6477 true chr2: 33443561-33450037 Medicago truncatula
Medtr2g079460 1.0kb downstream 1.0kb downstream 1000 false chr2: 33449038-33450037 Medicago truncatula
Medtr2g079460 2.0kb upstream 2.0kb upstream 7477 true chr2: 33441561-33449037 Medicago truncatula
Medtr2g079460 2.0kb upstream 2.0kb upstream 2000 false chr2: 33441561-33443560 Medicago truncatula
Medtr2g079460 2.0kb downstream 2.0kb downstream 7477 true chr2: 33443561-33451037 Medicago truncatula
Medtr2g079460 2.0kb downstream 2.0kb downstream 2000 false chr2: 33449038-33451037 Medicago truncatula
Medtr2g079460 5.0kb upstream 5.0kb upstream 10477 true chr2: 33438561-33449037 Medicago truncatula
Medtr2g079460 5.0kb upstream 5.0kb upstream 5000 false chr2: 33438561-33443560 Medicago truncatula
Medtr2g079460 5.0kb downstream 5.0kb downstream 10477 true chr2: 33443561-33454037 Medicago truncatula
Medtr2g079460 5.0kb downstream 5.0kb downstream 5000 false chr2: 33449038-33454037 Medicago truncatula
Medtr2g079460 10.0kb upstream 10.0kb upstream 15477 true chr2: 33433561-33449037 Medicago truncatula
Medtr2g079460 10.0kb upstream 10.0kb upstream 10000 false chr2: 33433561-33443560 Medicago truncatula
Medtr2g079460 10.0kb downstream 10.0kb downstream 15477 true chr2: 33443561-33459037 Medicago truncatula
Medtr2g079460 10.0kb downstream 10.0kb downstream 10000 false chr2: 33449038-33459037 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041445 5273 Angiosperm View MSA
122300408 5265 Fabidae View MSA
124062037 5270 Rosid View MSA
123739999 5271 Pentapetalae View MSA
122786556 5272 Eudicot View MSA
121345891 5274 Embryophyte View MSA
123428048 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.218        
cufflinks 2.87        
cufflinks 2.786        
cufflinks 0.853       Low
cufflinks 2.906        
cufflinks 1.491        
cufflinks 1.633        
cufflinks 2.487        
cufflinks 1.011       Low

0 Strain