Gene : Medtr2g079120 M. truncatula Mt4.0v1
Defline:  (1 of 35) PF05678 - VQ motif (VQ) Description:  VQ motif protein
Genomic Order:  4146 Name:  ? Medtr2g079120
Secondary Identifier:  ? PAC:31067016
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g079120 0.5kb upstream 0.5kb upstream 1705 true chr2: 33154057-33155761 Medicago truncatula
Medtr2g079120 0.5kb upstream 0.5kb upstream 500 false chr2: 33155262-33155761 Medicago truncatula
Medtr2g079120 0.5kb downstream 0.5kb downstream 1705 true chr2: 33153557-33155261 Medicago truncatula
Medtr2g079120 0.5kb downstream 0.5kb downstream 500 false chr2: 33153557-33154056 Medicago truncatula
Medtr2g079120 1.0kb upstream 1.0kb upstream 2205 true chr2: 33154057-33156261 Medicago truncatula
Medtr2g079120 1.0kb upstream 1.0kb upstream 1000 false chr2: 33155262-33156261 Medicago truncatula
Medtr2g079120 1.0kb downstream 1.0kb downstream 2205 true chr2: 33153057-33155261 Medicago truncatula
Medtr2g079120 1.0kb downstream 1.0kb downstream 1000 false chr2: 33153057-33154056 Medicago truncatula
Medtr2g079120 2.0kb upstream 2.0kb upstream 3205 true chr2: 33154057-33157261 Medicago truncatula
Medtr2g079120 2.0kb upstream 2.0kb upstream 2000 false chr2: 33155262-33157261 Medicago truncatula
Medtr2g079120 2.0kb downstream 2.0kb downstream 3205 true chr2: 33152057-33155261 Medicago truncatula
Medtr2g079120 2.0kb downstream 2.0kb downstream 2000 false chr2: 33152057-33154056 Medicago truncatula
Medtr2g079120 5.0kb upstream 5.0kb upstream 6205 true chr2: 33154057-33160261 Medicago truncatula
Medtr2g079120 5.0kb upstream 5.0kb upstream 5000 false chr2: 33155262-33160261 Medicago truncatula
Medtr2g079120 5.0kb downstream 5.0kb downstream 6205 true chr2: 33149057-33155261 Medicago truncatula
Medtr2g079120 5.0kb downstream 5.0kb downstream 5000 false chr2: 33149057-33154056 Medicago truncatula
Medtr2g079120 10.0kb upstream 10.0kb upstream 11205 true chr2: 33154057-33165261 Medicago truncatula
Medtr2g079120 10.0kb upstream 10.0kb upstream 10000 false chr2: 33155262-33165261 Medicago truncatula
Medtr2g079120 10.0kb downstream 10.0kb downstream 11205 true chr2: 33144057-33155261 Medicago truncatula
Medtr2g079120 10.0kb downstream 10.0kb downstream 10000 false chr2: 33144057-33154056 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311492 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 194.519     High High
cufflinks 52.375     High  
cufflinks 82.01     High  
cufflinks 63.249     High  
cufflinks 83.089     High  
cufflinks 34.228     High Low
cufflinks 87.108     High  
cufflinks 75.275     High  
cufflinks 35.85     High Low

0 Strain