Gene : Medtr2g079110 M. truncatula Mt4.0v1
Defline:  (1 of 1) 3.1.3.77 - Acireductone synthase / E-1 enolase-phosphatase Description:  methylthioribulose-1-phosphate dehydratase
Genomic Order:  4145 Name:  ? Medtr2g079110
Secondary Identifier:  ? PAC:31067999
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-4361 Medicago truncatula pathologic  
Mtruncatula PWY-7270 Medicago truncatula pathologic  
Mtruncatula PWY-7528 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g079110 0.5kb upstream 0.5kb upstream 9438 true chr2: 33140355-33149792 Medicago truncatula
Medtr2g079110 0.5kb upstream 0.5kb upstream 500 false chr2: 33140355-33140854 Medicago truncatula
Medtr2g079110 0.5kb downstream 0.5kb downstream 9438 true chr2: 33140855-33150292 Medicago truncatula
Medtr2g079110 0.5kb downstream 0.5kb downstream 500 false chr2: 33149793-33150292 Medicago truncatula
Medtr2g079110 1.0kb upstream 1.0kb upstream 9938 true chr2: 33139855-33149792 Medicago truncatula
Medtr2g079110 1.0kb upstream 1.0kb upstream 1000 false chr2: 33139855-33140854 Medicago truncatula
Medtr2g079110 1.0kb downstream 1.0kb downstream 9938 true chr2: 33140855-33150792 Medicago truncatula
Medtr2g079110 1.0kb downstream 1.0kb downstream 1000 false chr2: 33149793-33150792 Medicago truncatula
Medtr2g079110 2.0kb upstream 2.0kb upstream 10938 true chr2: 33138855-33149792 Medicago truncatula
Medtr2g079110 2.0kb upstream 2.0kb upstream 2000 false chr2: 33138855-33140854 Medicago truncatula
Medtr2g079110 2.0kb downstream 2.0kb downstream 10938 true chr2: 33140855-33151792 Medicago truncatula
Medtr2g079110 2.0kb downstream 2.0kb downstream 2000 false chr2: 33149793-33151792 Medicago truncatula
Medtr2g079110 5.0kb upstream 5.0kb upstream 13938 true chr2: 33135855-33149792 Medicago truncatula
Medtr2g079110 5.0kb upstream 5.0kb upstream 5000 false chr2: 33135855-33140854 Medicago truncatula
Medtr2g079110 5.0kb downstream 5.0kb downstream 13938 true chr2: 33140855-33154792 Medicago truncatula
Medtr2g079110 5.0kb downstream 5.0kb downstream 5000 false chr2: 33149793-33154792 Medicago truncatula
Medtr2g079110 10.0kb upstream 10.0kb upstream 18938 true chr2: 33130855-33149792 Medicago truncatula
Medtr2g079110 10.0kb upstream 10.0kb upstream 10000 false chr2: 33130855-33140854 Medicago truncatula
Medtr2g079110 10.0kb downstream 10.0kb downstream 18938 true chr2: 33140855-33159792 Medicago truncatula
Medtr2g079110 10.0kb downstream 10.0kb downstream 10000 false chr2: 33149793-33159792 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306474 5265 Fabidae View MSA
124067379 5270 Rosid View MSA
123736573 5271 Pentapetalae View MSA
122786615 5272 Eudicot View MSA
122042020 5273 Angiosperm View MSA
121345843 5274 Embryophyte View MSA
123425019 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.107     High  
cufflinks 16.39     High  
cufflinks 21.959     High High
cufflinks 3.971       Low
cufflinks 13.195     High  
cufflinks 2.505       Low
cufflinks 7.388        
cufflinks 17.419     High  
cufflinks 5.976        

0 Strain