Gene : Medtr2g062940 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR35326:SF2 - PROTEIN PSBN Description:  photosystem II reaction center protein N
Genomic Order:  3405 Name:  ? Medtr2g062940
Secondary Identifier:  ? PAC:31067079
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g062940 0.5kb upstream 0.5kb upstream 882 true chr2: 26615061-26615942 Medicago truncatula
Medtr2g062940 0.5kb upstream 0.5kb upstream 500 false chr2: 26615061-26615560 Medicago truncatula
Medtr2g062940 0.5kb downstream 0.5kb downstream 882 true chr2: 26615561-26616442 Medicago truncatula
Medtr2g062940 0.5kb downstream 0.5kb downstream 500 false chr2: 26615943-26616442 Medicago truncatula
Medtr2g062940 1.0kb upstream 1.0kb upstream 1382 true chr2: 26614561-26615942 Medicago truncatula
Medtr2g062940 1.0kb upstream 1.0kb upstream 1000 false chr2: 26614561-26615560 Medicago truncatula
Medtr2g062940 1.0kb downstream 1.0kb downstream 1382 true chr2: 26615561-26616942 Medicago truncatula
Medtr2g062940 1.0kb downstream 1.0kb downstream 1000 false chr2: 26615943-26616942 Medicago truncatula
Medtr2g062940 2.0kb upstream 2.0kb upstream 2382 true chr2: 26613561-26615942 Medicago truncatula
Medtr2g062940 2.0kb upstream 2.0kb upstream 2000 false chr2: 26613561-26615560 Medicago truncatula
Medtr2g062940 2.0kb downstream 2.0kb downstream 2382 true chr2: 26615561-26617942 Medicago truncatula
Medtr2g062940 2.0kb downstream 2.0kb downstream 2000 false chr2: 26615943-26617942 Medicago truncatula
Medtr2g062940 5.0kb upstream 5.0kb upstream 5382 true chr2: 26610561-26615942 Medicago truncatula
Medtr2g062940 5.0kb upstream 5.0kb upstream 5000 false chr2: 26610561-26615560 Medicago truncatula
Medtr2g062940 5.0kb downstream 5.0kb downstream 5382 true chr2: 26615561-26620942 Medicago truncatula
Medtr2g062940 5.0kb downstream 5.0kb downstream 5000 false chr2: 26615943-26620942 Medicago truncatula
Medtr2g062940 10.0kb upstream 10.0kb upstream 10382 true chr2: 26605561-26615942 Medicago truncatula
Medtr2g062940 10.0kb upstream 10.0kb upstream 10000 false chr2: 26605561-26615560 Medicago truncatula
Medtr2g062940 10.0kb downstream 10.0kb downstream 10382 true chr2: 26615561-26625942 Medicago truncatula
Medtr2g062940 10.0kb downstream 10.0kb downstream 10000 false chr2: 26615943-26625942 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121621198 5273 Angiosperm Singleton cluster - no MSA
122258702 5265 Fabidae Singleton cluster - no MSA
124000189 5270 Rosid Singleton cluster - no MSA
123574434 5271 Pentapetalae Singleton cluster - no MSA
122609151 5272 Eudicot Singleton cluster - no MSA
120893302 5274 Embryophyte Singleton cluster - no MSA
122933957 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain