Gene : Medtr2g062730 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31989:SF48 - PROTEIN SOMBRERO Description:  NAC transcription factor-like protein
Genomic Order:  3388 Name:  ? Medtr2g062730
Secondary Identifier:  ? PAC:31063778
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g062730 0.5kb upstream 0.5kb upstream 4345 true chr2: 26493931-26498275 Medicago truncatula
Medtr2g062730 0.5kb upstream 0.5kb upstream 500 false chr2: 26493931-26494430 Medicago truncatula
Medtr2g062730 0.5kb downstream 0.5kb downstream 4345 true chr2: 26494431-26498775 Medicago truncatula
Medtr2g062730 0.5kb downstream 0.5kb downstream 500 false chr2: 26498276-26498775 Medicago truncatula
Medtr2g062730 1.0kb upstream 1.0kb upstream 4845 true chr2: 26493431-26498275 Medicago truncatula
Medtr2g062730 1.0kb upstream 1.0kb upstream 1000 false chr2: 26493431-26494430 Medicago truncatula
Medtr2g062730 1.0kb downstream 1.0kb downstream 4845 true chr2: 26494431-26499275 Medicago truncatula
Medtr2g062730 1.0kb downstream 1.0kb downstream 1000 false chr2: 26498276-26499275 Medicago truncatula
Medtr2g062730 2.0kb upstream 2.0kb upstream 5845 true chr2: 26492431-26498275 Medicago truncatula
Medtr2g062730 2.0kb upstream 2.0kb upstream 2000 false chr2: 26492431-26494430 Medicago truncatula
Medtr2g062730 2.0kb downstream 2.0kb downstream 5845 true chr2: 26494431-26500275 Medicago truncatula
Medtr2g062730 2.0kb downstream 2.0kb downstream 2000 false chr2: 26498276-26500275 Medicago truncatula
Medtr2g062730 5.0kb upstream 5.0kb upstream 8845 true chr2: 26489431-26498275 Medicago truncatula
Medtr2g062730 5.0kb upstream 5.0kb upstream 5000 false chr2: 26489431-26494430 Medicago truncatula
Medtr2g062730 5.0kb downstream 5.0kb downstream 8845 true chr2: 26494431-26503275 Medicago truncatula
Medtr2g062730 5.0kb downstream 5.0kb downstream 5000 false chr2: 26498276-26503275 Medicago truncatula
Medtr2g062730 10.0kb upstream 10.0kb upstream 13845 true chr2: 26484431-26498275 Medicago truncatula
Medtr2g062730 10.0kb upstream 10.0kb upstream 10000 false chr2: 26484431-26494430 Medicago truncatula
Medtr2g062730 10.0kb downstream 10.0kb downstream 13845 true chr2: 26494431-26508275 Medicago truncatula
Medtr2g062730 10.0kb downstream 10.0kb downstream 10000 false chr2: 26498276-26508275 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299411 5265 Fabidae View MSA
124063722 5270 Rosid View MSA
123740377 5271 Pentapetalae View MSA
122788631 5272 Eudicot View MSA
122045964 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.337        
cufflinks 0.051     Low Low
cufflinks 0.065     Low Low
cufflinks 0.633        
cufflinks 0.229        
cufflinks 0.422        
cufflinks 1.8       High
cufflinks 0.069       Low
cufflinks 1.459       High

0 Strain