Gene : Medtr2g065720 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11165:SF24 - S-PHASE KINASE-ASSOCIATED PROTEIN 1 Description:  SCF ubiquitin ligase, SKP1 component
Genomic Order:  3484 Name:  ? Medtr2g065720
Secondary Identifier:  ? PAC:31068380
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g065720 0.5kb upstream 0.5kb upstream 1118 true chr2: 27548893-27550010 Medicago truncatula
Medtr2g065720 0.5kb upstream 0.5kb upstream 500 false chr2: 27549511-27550010 Medicago truncatula
Medtr2g065720 0.5kb downstream 0.5kb downstream 1118 true chr2: 27548393-27549510 Medicago truncatula
Medtr2g065720 0.5kb downstream 0.5kb downstream 500 false chr2: 27548393-27548892 Medicago truncatula
Medtr2g065720 1.0kb upstream 1.0kb upstream 1618 true chr2: 27548893-27550510 Medicago truncatula
Medtr2g065720 1.0kb upstream 1.0kb upstream 1000 false chr2: 27549511-27550510 Medicago truncatula
Medtr2g065720 1.0kb downstream 1.0kb downstream 1618 true chr2: 27547893-27549510 Medicago truncatula
Medtr2g065720 1.0kb downstream 1.0kb downstream 1000 false chr2: 27547893-27548892 Medicago truncatula
Medtr2g065720 2.0kb upstream 2.0kb upstream 2618 true chr2: 27548893-27551510 Medicago truncatula
Medtr2g065720 2.0kb upstream 2.0kb upstream 2000 false chr2: 27549511-27551510 Medicago truncatula
Medtr2g065720 2.0kb downstream 2.0kb downstream 2618 true chr2: 27546893-27549510 Medicago truncatula
Medtr2g065720 2.0kb downstream 2.0kb downstream 2000 false chr2: 27546893-27548892 Medicago truncatula
Medtr2g065720 5.0kb upstream 5.0kb upstream 5618 true chr2: 27548893-27554510 Medicago truncatula
Medtr2g065720 5.0kb upstream 5.0kb upstream 5000 false chr2: 27549511-27554510 Medicago truncatula
Medtr2g065720 5.0kb downstream 5.0kb downstream 5618 true chr2: 27543893-27549510 Medicago truncatula
Medtr2g065720 5.0kb downstream 5.0kb downstream 5000 false chr2: 27543893-27548892 Medicago truncatula
Medtr2g065720 10.0kb upstream 10.0kb upstream 10618 true chr2: 27548893-27559510 Medicago truncatula
Medtr2g065720 10.0kb upstream 10.0kb upstream 10000 false chr2: 27549511-27559510 Medicago truncatula
Medtr2g065720 10.0kb downstream 10.0kb downstream 10618 true chr2: 27538893-27549510 Medicago truncatula
Medtr2g065720 10.0kb downstream 10.0kb downstream 10000 false chr2: 27538893-27548892 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029816 5273 Angiosperm View MSA
122313171 5265 Fabidae View MSA
124075211 5270 Rosid View MSA
123757626 5271 Pentapetalae View MSA
122798327 5272 Eudicot View MSA
121299090 5274 Embryophyte View MSA
123337010 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.637        
cufflinks 0.164       Low
cufflinks 0.267        
cufflinks 0.988        
cufflinks 1.103        
cufflinks 2.273       High
cufflinks 2.058       High
cufflinks 0.255       Low
cufflinks 0.791        

0 Strain