Gene : Medtr2g064840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23115:SF138 - TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC Description:  translation initiation factor IF-2
Genomic Order:  3693 Name:  ? Medtr2g064840
Secondary Identifier:  ? PAC:31067083
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g064840 0.5kb upstream 0.5kb upstream 8371 true chr2: 29412452-29420822 Medicago truncatula
Medtr2g064840 0.5kb upstream 0.5kb upstream 500 false chr2: 29412452-29412951 Medicago truncatula
Medtr2g064840 0.5kb downstream 0.5kb downstream 8371 true chr2: 29412952-29421322 Medicago truncatula
Medtr2g064840 0.5kb downstream 0.5kb downstream 500 false chr2: 29420823-29421322 Medicago truncatula
Medtr2g064840 1.0kb upstream 1.0kb upstream 8871 true chr2: 29411952-29420822 Medicago truncatula
Medtr2g064840 1.0kb upstream 1.0kb upstream 1000 false chr2: 29411952-29412951 Medicago truncatula
Medtr2g064840 1.0kb downstream 1.0kb downstream 8871 true chr2: 29412952-29421822 Medicago truncatula
Medtr2g064840 1.0kb downstream 1.0kb downstream 1000 false chr2: 29420823-29421822 Medicago truncatula
Medtr2g064840 2.0kb upstream 2.0kb upstream 9871 true chr2: 29410952-29420822 Medicago truncatula
Medtr2g064840 2.0kb upstream 2.0kb upstream 2000 false chr2: 29410952-29412951 Medicago truncatula
Medtr2g064840 2.0kb downstream 2.0kb downstream 9871 true chr2: 29412952-29422822 Medicago truncatula
Medtr2g064840 2.0kb downstream 2.0kb downstream 2000 false chr2: 29420823-29422822 Medicago truncatula
Medtr2g064840 5.0kb upstream 5.0kb upstream 12871 true chr2: 29407952-29420822 Medicago truncatula
Medtr2g064840 5.0kb upstream 5.0kb upstream 5000 false chr2: 29407952-29412951 Medicago truncatula
Medtr2g064840 5.0kb downstream 5.0kb downstream 12871 true chr2: 29412952-29425822 Medicago truncatula
Medtr2g064840 5.0kb downstream 5.0kb downstream 5000 false chr2: 29420823-29425822 Medicago truncatula
Medtr2g064840 10.0kb upstream 10.0kb upstream 17871 true chr2: 29402952-29420822 Medicago truncatula
Medtr2g064840 10.0kb upstream 10.0kb upstream 10000 false chr2: 29402952-29412951 Medicago truncatula
Medtr2g064840 10.0kb downstream 10.0kb downstream 17871 true chr2: 29412952-29430822 Medicago truncatula
Medtr2g064840 10.0kb downstream 10.0kb downstream 10000 false chr2: 29420823-29430822 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306943 5265 Fabidae View MSA
124065303 5270 Rosid View MSA
123736618 5271 Pentapetalae View MSA
122788902 5272 Eudicot View MSA
122051139 5273 Angiosperm View MSA
121347361 5274 Embryophyte View MSA
123428388 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.179        
cufflinks 46.261     High High
cufflinks 32.201     High  
cufflinks 0.629        
cufflinks 72.772     High High
cufflinks 0.399       Low
cufflinks 1.005        
cufflinks 39.335     High  
cufflinks 0.823        

0 Strain