Gene : Medtr2g067980 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF00069//PF00314//PF01453 - Protein kinase domain (Pkinase) // Thaumatin family (Thaumatin) // D-mannose binding lectin (B_lectin) Description:  lectin kinase family protein
Genomic Order:  3588 Name:  ? Medtr2g067980
Secondary Identifier:  ? PAC:31062647
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g067980 0.5kb upstream 0.5kb upstream 4392 true chr2: 28441720-28446111 Medicago truncatula
Medtr2g067980 0.5kb upstream 0.5kb upstream 500 false chr2: 28441720-28442219 Medicago truncatula
Medtr2g067980 0.5kb downstream 0.5kb downstream 4392 true chr2: 28442220-28446611 Medicago truncatula
Medtr2g067980 0.5kb downstream 0.5kb downstream 500 false chr2: 28446112-28446611 Medicago truncatula
Medtr2g067980 1.0kb upstream 1.0kb upstream 4892 true chr2: 28441220-28446111 Medicago truncatula
Medtr2g067980 1.0kb upstream 1.0kb upstream 1000 false chr2: 28441220-28442219 Medicago truncatula
Medtr2g067980 1.0kb downstream 1.0kb downstream 4892 true chr2: 28442220-28447111 Medicago truncatula
Medtr2g067980 1.0kb downstream 1.0kb downstream 1000 false chr2: 28446112-28447111 Medicago truncatula
Medtr2g067980 2.0kb upstream 2.0kb upstream 5892 true chr2: 28440220-28446111 Medicago truncatula
Medtr2g067980 2.0kb upstream 2.0kb upstream 2000 false chr2: 28440220-28442219 Medicago truncatula
Medtr2g067980 2.0kb downstream 2.0kb downstream 5892 true chr2: 28442220-28448111 Medicago truncatula
Medtr2g067980 2.0kb downstream 2.0kb downstream 2000 false chr2: 28446112-28448111 Medicago truncatula
Medtr2g067980 5.0kb upstream 5.0kb upstream 8892 true chr2: 28437220-28446111 Medicago truncatula
Medtr2g067980 5.0kb upstream 5.0kb upstream 5000 false chr2: 28437220-28442219 Medicago truncatula
Medtr2g067980 5.0kb downstream 5.0kb downstream 8892 true chr2: 28442220-28451111 Medicago truncatula
Medtr2g067980 5.0kb downstream 5.0kb downstream 5000 false chr2: 28446112-28451111 Medicago truncatula
Medtr2g067980 10.0kb upstream 10.0kb upstream 13892 true chr2: 28432220-28446111 Medicago truncatula
Medtr2g067980 10.0kb upstream 10.0kb upstream 10000 false chr2: 28432220-28442219 Medicago truncatula
Medtr2g067980 10.0kb downstream 10.0kb downstream 13892 true chr2: 28442220-28456111 Medicago truncatula
Medtr2g067980 10.0kb downstream 10.0kb downstream 10000 false chr2: 28446112-28456111 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312394 5265 Fabidae View MSA
124074422 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.199     High High
cufflinks 2.381        
cufflinks 6.295        
cufflinks 0.754       Low
cufflinks 3.515        
cufflinks 4.466        
cufflinks 4.704        
cufflinks 3.341        
cufflinks 2.436        

0 Strain