Gene : Medtr2g069470 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21043:SF1 - PROTEIN IOJAP, CHLOROPLASTIC Description:  ribosome silencing factor
Genomic Order:  3641 Name:  ? Medtr2g069470
Secondary Identifier:  ? PAC:31063946
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g069470 0.5kb upstream 0.5kb upstream 3609 true chr2: 28894062-28897670 Medicago truncatula
Medtr2g069470 0.5kb upstream 0.5kb upstream 500 false chr2: 28894062-28894561 Medicago truncatula
Medtr2g069470 0.5kb downstream 0.5kb downstream 3609 true chr2: 28894562-28898170 Medicago truncatula
Medtr2g069470 0.5kb downstream 0.5kb downstream 500 false chr2: 28897671-28898170 Medicago truncatula
Medtr2g069470 1.0kb upstream 1.0kb upstream 4109 true chr2: 28893562-28897670 Medicago truncatula
Medtr2g069470 1.0kb upstream 1.0kb upstream 1000 false chr2: 28893562-28894561 Medicago truncatula
Medtr2g069470 1.0kb downstream 1.0kb downstream 4109 true chr2: 28894562-28898670 Medicago truncatula
Medtr2g069470 1.0kb downstream 1.0kb downstream 1000 false chr2: 28897671-28898670 Medicago truncatula
Medtr2g069470 2.0kb upstream 2.0kb upstream 5109 true chr2: 28892562-28897670 Medicago truncatula
Medtr2g069470 2.0kb upstream 2.0kb upstream 2000 false chr2: 28892562-28894561 Medicago truncatula
Medtr2g069470 2.0kb downstream 2.0kb downstream 5109 true chr2: 28894562-28899670 Medicago truncatula
Medtr2g069470 2.0kb downstream 2.0kb downstream 2000 false chr2: 28897671-28899670 Medicago truncatula
Medtr2g069470 5.0kb upstream 5.0kb upstream 8109 true chr2: 28889562-28897670 Medicago truncatula
Medtr2g069470 5.0kb upstream 5.0kb upstream 5000 false chr2: 28889562-28894561 Medicago truncatula
Medtr2g069470 5.0kb downstream 5.0kb downstream 8109 true chr2: 28894562-28902670 Medicago truncatula
Medtr2g069470 5.0kb downstream 5.0kb downstream 5000 false chr2: 28897671-28902670 Medicago truncatula
Medtr2g069470 10.0kb upstream 10.0kb upstream 13109 true chr2: 28884562-28897670 Medicago truncatula
Medtr2g069470 10.0kb upstream 10.0kb upstream 10000 false chr2: 28884562-28894561 Medicago truncatula
Medtr2g069470 10.0kb downstream 10.0kb downstream 13109 true chr2: 28894562-28907670 Medicago truncatula
Medtr2g069470 10.0kb downstream 10.0kb downstream 10000 false chr2: 28897671-28907670 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300008 5265 Fabidae View MSA
124067704 5270 Rosid View MSA
123743843 5271 Pentapetalae View MSA
122785584 5272 Eudicot View MSA
122043136 5273 Angiosperm View MSA
121343948 5274 Embryophyte View MSA
123426763 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.84        
cufflinks 6.271        
cufflinks 12.266     High High
cufflinks 2.877        
cufflinks 12.915     High High
cufflinks 2.725        
cufflinks 2.517        
cufflinks 9.299     High  
cufflinks 0.978       Low

0 Strain