Gene : Medtr2g070410 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10509:SF27 - PROTEIN COMT-1 Description:  caffeoyl-CoA O-methyltransferase
Genomic Order:  3722 Name:  ? Medtr2g070410
Secondary Identifier:  ? PAC:31068829
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1121 Medicago truncatula pathologic  
Mtruncatula PWY-361 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g070410 0.5kb upstream 0.5kb upstream 4703 true chr2: 29631829-29636531 Medicago truncatula
Medtr2g070410 0.5kb upstream 0.5kb upstream 500 false chr2: 29636032-29636531 Medicago truncatula
Medtr2g070410 0.5kb downstream 0.5kb downstream 4703 true chr2: 29631329-29636031 Medicago truncatula
Medtr2g070410 0.5kb downstream 0.5kb downstream 500 false chr2: 29631329-29631828 Medicago truncatula
Medtr2g070410 1.0kb upstream 1.0kb upstream 5203 true chr2: 29631829-29637031 Medicago truncatula
Medtr2g070410 1.0kb upstream 1.0kb upstream 1000 false chr2: 29636032-29637031 Medicago truncatula
Medtr2g070410 1.0kb downstream 1.0kb downstream 5203 true chr2: 29630829-29636031 Medicago truncatula
Medtr2g070410 1.0kb downstream 1.0kb downstream 1000 false chr2: 29630829-29631828 Medicago truncatula
Medtr2g070410 2.0kb upstream 2.0kb upstream 6203 true chr2: 29631829-29638031 Medicago truncatula
Medtr2g070410 2.0kb upstream 2.0kb upstream 2000 false chr2: 29636032-29638031 Medicago truncatula
Medtr2g070410 2.0kb downstream 2.0kb downstream 6203 true chr2: 29629829-29636031 Medicago truncatula
Medtr2g070410 2.0kb downstream 2.0kb downstream 2000 false chr2: 29629829-29631828 Medicago truncatula
Medtr2g070410 5.0kb upstream 5.0kb upstream 9203 true chr2: 29631829-29641031 Medicago truncatula
Medtr2g070410 5.0kb upstream 5.0kb upstream 5000 false chr2: 29636032-29641031 Medicago truncatula
Medtr2g070410 5.0kb downstream 5.0kb downstream 9203 true chr2: 29626829-29636031 Medicago truncatula
Medtr2g070410 5.0kb downstream 5.0kb downstream 5000 false chr2: 29626829-29631828 Medicago truncatula
Medtr2g070410 10.0kb upstream 10.0kb upstream 14203 true chr2: 29631829-29646031 Medicago truncatula
Medtr2g070410 10.0kb upstream 10.0kb upstream 10000 false chr2: 29636032-29646031 Medicago truncatula
Medtr2g070410 10.0kb downstream 10.0kb downstream 14203 true chr2: 29621829-29636031 Medicago truncatula
Medtr2g070410 10.0kb downstream 10.0kb downstream 10000 false chr2: 29621829-29631828 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303007 5265 Fabidae View MSA
124062040 5270 Rosid View MSA
123738490 5271 Pentapetalae View MSA
122794453 5272 Eudicot View MSA
122046584 5273 Angiosperm View MSA
121345424 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.252        
cufflinks 1.023        
cufflinks 3.609        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.472        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 2.667        
cufflinks 0.013     Low Low

0 Strain