Gene : Medtr2g437700 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32382:SF0 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 Description:  fasciclin-like arabinogalactan protein
Genomic Order:  2053 Name:  ? Medtr2g437700
Secondary Identifier:  ? PAC:31065080
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g437700 0.5kb upstream 0.5kb upstream 2438 true chr2: 14853443-14855880 Medicago truncatula
Medtr2g437700 0.5kb upstream 0.5kb upstream 500 false chr2: 14853443-14853942 Medicago truncatula
Medtr2g437700 0.5kb downstream 0.5kb downstream 2438 true chr2: 14853943-14856380 Medicago truncatula
Medtr2g437700 0.5kb downstream 0.5kb downstream 500 false chr2: 14855881-14856380 Medicago truncatula
Medtr2g437700 1.0kb upstream 1.0kb upstream 2938 true chr2: 14852943-14855880 Medicago truncatula
Medtr2g437700 1.0kb upstream 1.0kb upstream 1000 false chr2: 14852943-14853942 Medicago truncatula
Medtr2g437700 1.0kb downstream 1.0kb downstream 2938 true chr2: 14853943-14856880 Medicago truncatula
Medtr2g437700 1.0kb downstream 1.0kb downstream 1000 false chr2: 14855881-14856880 Medicago truncatula
Medtr2g437700 2.0kb upstream 2.0kb upstream 3938 true chr2: 14851943-14855880 Medicago truncatula
Medtr2g437700 2.0kb upstream 2.0kb upstream 2000 false chr2: 14851943-14853942 Medicago truncatula
Medtr2g437700 2.0kb downstream 2.0kb downstream 3938 true chr2: 14853943-14857880 Medicago truncatula
Medtr2g437700 2.0kb downstream 2.0kb downstream 2000 false chr2: 14855881-14857880 Medicago truncatula
Medtr2g437700 5.0kb upstream 5.0kb upstream 6938 true chr2: 14848943-14855880 Medicago truncatula
Medtr2g437700 5.0kb upstream 5.0kb upstream 5000 false chr2: 14848943-14853942 Medicago truncatula
Medtr2g437700 5.0kb downstream 5.0kb downstream 6938 true chr2: 14853943-14860880 Medicago truncatula
Medtr2g437700 5.0kb downstream 5.0kb downstream 5000 false chr2: 14855881-14860880 Medicago truncatula
Medtr2g437700 10.0kb upstream 10.0kb upstream 11938 true chr2: 14843943-14855880 Medicago truncatula
Medtr2g437700 10.0kb upstream 10.0kb upstream 10000 false chr2: 14843943-14853942 Medicago truncatula
Medtr2g437700 10.0kb downstream 10.0kb downstream 11938 true chr2: 14853943-14865880 Medicago truncatula
Medtr2g437700 10.0kb downstream 10.0kb downstream 10000 false chr2: 14855881-14865880 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313725 5265 Fabidae View MSA
124061548 5270 Rosid View MSA
123744352 5271 Pentapetalae View MSA
122795862 5272 Eudicot View MSA
122048693 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.062        
cufflinks 6.236        
cufflinks 3.728        
cufflinks 4.594        
cufflinks 7.482       High
cufflinks 2.146        
cufflinks 0.739       Low
cufflinks 4.414        
cufflinks 2.45        

0 Strain