Gene : Medtr2g437670 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Description:  type II superfamily restriction endonuclease
Genomic Order:  2051 Name:  ? Medtr2g437670
Secondary Identifier:  ? PAC:31065289
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g437670 0.5kb upstream 0.5kb upstream 2552 true chr2: 14843379-14845930 Medicago truncatula
Medtr2g437670 0.5kb upstream 0.5kb upstream 500 false chr2: 14845431-14845930 Medicago truncatula
Medtr2g437670 0.5kb downstream 0.5kb downstream 2552 true chr2: 14842879-14845430 Medicago truncatula
Medtr2g437670 0.5kb downstream 0.5kb downstream 500 false chr2: 14842879-14843378 Medicago truncatula
Medtr2g437670 1.0kb upstream 1.0kb upstream 3052 true chr2: 14843379-14846430 Medicago truncatula
Medtr2g437670 1.0kb upstream 1.0kb upstream 1000 false chr2: 14845431-14846430 Medicago truncatula
Medtr2g437670 1.0kb downstream 1.0kb downstream 3052 true chr2: 14842379-14845430 Medicago truncatula
Medtr2g437670 1.0kb downstream 1.0kb downstream 1000 false chr2: 14842379-14843378 Medicago truncatula
Medtr2g437670 2.0kb upstream 2.0kb upstream 4052 true chr2: 14843379-14847430 Medicago truncatula
Medtr2g437670 2.0kb upstream 2.0kb upstream 2000 false chr2: 14845431-14847430 Medicago truncatula
Medtr2g437670 2.0kb downstream 2.0kb downstream 4052 true chr2: 14841379-14845430 Medicago truncatula
Medtr2g437670 2.0kb downstream 2.0kb downstream 2000 false chr2: 14841379-14843378 Medicago truncatula
Medtr2g437670 5.0kb upstream 5.0kb upstream 7052 true chr2: 14843379-14850430 Medicago truncatula
Medtr2g437670 5.0kb upstream 5.0kb upstream 5000 false chr2: 14845431-14850430 Medicago truncatula
Medtr2g437670 5.0kb downstream 5.0kb downstream 7052 true chr2: 14838379-14845430 Medicago truncatula
Medtr2g437670 5.0kb downstream 5.0kb downstream 5000 false chr2: 14838379-14843378 Medicago truncatula
Medtr2g437670 10.0kb upstream 10.0kb upstream 12052 true chr2: 14843379-14855430 Medicago truncatula
Medtr2g437670 10.0kb upstream 10.0kb upstream 10000 false chr2: 14845431-14855430 Medicago truncatula
Medtr2g437670 10.0kb downstream 10.0kb downstream 12052 true chr2: 14833379-14845430 Medicago truncatula
Medtr2g437670 10.0kb downstream 10.0kb downstream 10000 false chr2: 14833379-14843378 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306430 5265 Fabidae View MSA
124067156 5270 Rosid View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.198        
cufflinks 0.216        
cufflinks 0.261        
cufflinks 0.046     Low Low
cufflinks 0.402       High
cufflinks 0.215        
cufflinks 0.166        
cufflinks 0.168        
cufflinks 0.168        

0 Strain