Gene : Medtr2g437460 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  pentatricopeptide (PPR) repeat protein
Genomic Order:  2034 Name:  ? Medtr2g437460
Secondary Identifier:  ? PAC:31069109
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g437460 0.5kb upstream 0.5kb upstream 3093 true chr2: 14710011-14713103 Medicago truncatula
Medtr2g437460 0.5kb upstream 0.5kb upstream 500 false chr2: 14710011-14710510 Medicago truncatula
Medtr2g437460 0.5kb downstream 0.5kb downstream 3093 true chr2: 14710511-14713603 Medicago truncatula
Medtr2g437460 0.5kb downstream 0.5kb downstream 500 false chr2: 14713104-14713603 Medicago truncatula
Medtr2g437460 1.0kb upstream 1.0kb upstream 3593 true chr2: 14709511-14713103 Medicago truncatula
Medtr2g437460 1.0kb upstream 1.0kb upstream 1000 false chr2: 14709511-14710510 Medicago truncatula
Medtr2g437460 1.0kb downstream 1.0kb downstream 3593 true chr2: 14710511-14714103 Medicago truncatula
Medtr2g437460 1.0kb downstream 1.0kb downstream 1000 false chr2: 14713104-14714103 Medicago truncatula
Medtr2g437460 2.0kb upstream 2.0kb upstream 4593 true chr2: 14708511-14713103 Medicago truncatula
Medtr2g437460 2.0kb upstream 2.0kb upstream 2000 false chr2: 14708511-14710510 Medicago truncatula
Medtr2g437460 2.0kb downstream 2.0kb downstream 4593 true chr2: 14710511-14715103 Medicago truncatula
Medtr2g437460 2.0kb downstream 2.0kb downstream 2000 false chr2: 14713104-14715103 Medicago truncatula
Medtr2g437460 5.0kb upstream 5.0kb upstream 7593 true chr2: 14705511-14713103 Medicago truncatula
Medtr2g437460 5.0kb upstream 5.0kb upstream 5000 false chr2: 14705511-14710510 Medicago truncatula
Medtr2g437460 5.0kb downstream 5.0kb downstream 7593 true chr2: 14710511-14718103 Medicago truncatula
Medtr2g437460 5.0kb downstream 5.0kb downstream 5000 false chr2: 14713104-14718103 Medicago truncatula
Medtr2g437460 10.0kb upstream 10.0kb upstream 12593 true chr2: 14700511-14713103 Medicago truncatula
Medtr2g437460 10.0kb upstream 10.0kb upstream 10000 false chr2: 14700511-14710510 Medicago truncatula
Medtr2g437460 10.0kb downstream 10.0kb downstream 12593 true chr2: 14710511-14723103 Medicago truncatula
Medtr2g437460 10.0kb downstream 10.0kb downstream 10000 false chr2: 14713104-14723103 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304903 5265 Fabidae View MSA
124067388 5270 Rosid View MSA
123740629 5271 Pentapetalae View MSA
122786381 5272 Eudicot View MSA
122046453 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310608 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.315        
cufflinks 11.783     High  
cufflinks 13.721     High  
cufflinks 3.364       Low
cufflinks 18.853     High High
cufflinks 2.561       Low
cufflinks 7.69        
cufflinks 10.943     High  
cufflinks 11.261     High  

0 Strain