Gene : Medtr2g450550 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31414:SF1 - TRANSMEMBRANE PROTEIN DDB_G0292058 Description:  transmembrane protein, putative
Genomic Order:  2959 Name:  ? Medtr2g450550
Secondary Identifier:  ? PAC:31062088
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g450550 0.5kb upstream 0.5kb upstream 6704 true chr2: 22445774-22452477 Medicago truncatula
Medtr2g450550 0.5kb upstream 0.5kb upstream 500 false chr2: 22445774-22446273 Medicago truncatula
Medtr2g450550 0.5kb downstream 0.5kb downstream 6704 true chr2: 22446274-22452977 Medicago truncatula
Medtr2g450550 0.5kb downstream 0.5kb downstream 500 false chr2: 22452478-22452977 Medicago truncatula
Medtr2g450550 1.0kb upstream 1.0kb upstream 7204 true chr2: 22445274-22452477 Medicago truncatula
Medtr2g450550 1.0kb upstream 1.0kb upstream 1000 false chr2: 22445274-22446273 Medicago truncatula
Medtr2g450550 1.0kb downstream 1.0kb downstream 7204 true chr2: 22446274-22453477 Medicago truncatula
Medtr2g450550 1.0kb downstream 1.0kb downstream 1000 false chr2: 22452478-22453477 Medicago truncatula
Medtr2g450550 2.0kb upstream 2.0kb upstream 8204 true chr2: 22444274-22452477 Medicago truncatula
Medtr2g450550 2.0kb upstream 2.0kb upstream 2000 false chr2: 22444274-22446273 Medicago truncatula
Medtr2g450550 2.0kb downstream 2.0kb downstream 8204 true chr2: 22446274-22454477 Medicago truncatula
Medtr2g450550 2.0kb downstream 2.0kb downstream 2000 false chr2: 22452478-22454477 Medicago truncatula
Medtr2g450550 5.0kb upstream 5.0kb upstream 11204 true chr2: 22441274-22452477 Medicago truncatula
Medtr2g450550 5.0kb upstream 5.0kb upstream 5000 false chr2: 22441274-22446273 Medicago truncatula
Medtr2g450550 5.0kb downstream 5.0kb downstream 11204 true chr2: 22446274-22457477 Medicago truncatula
Medtr2g450550 5.0kb downstream 5.0kb downstream 5000 false chr2: 22452478-22457477 Medicago truncatula
Medtr2g450550 10.0kb upstream 10.0kb upstream 16204 true chr2: 22436274-22452477 Medicago truncatula
Medtr2g450550 10.0kb upstream 10.0kb upstream 10000 false chr2: 22436274-22446273 Medicago truncatula
Medtr2g450550 10.0kb downstream 10.0kb downstream 16204 true chr2: 22446274-22462477 Medicago truncatula
Medtr2g450550 10.0kb downstream 10.0kb downstream 10000 false chr2: 22452478-22462477 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304534 5265 Fabidae View MSA
124069186 5270 Rosid View MSA
123747530 5271 Pentapetalae View MSA
122793265 5272 Eudicot View MSA
122043467 5273 Angiosperm View MSA
123429125 5275 Viridiplantae View MSA
121350323 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.276       Low
cufflinks 4.788       High
cufflinks 2.209        
cufflinks 1.203        
cufflinks 3.686        
cufflinks 0.137     Low Low
cufflinks 1.093        
cufflinks 2.882        
cufflinks 1.703        

0 Strain