Gene : Medtr2g450720 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF07647 - SAM domain (Sterile alpha motif) (SAM_2) Description:  SAM domain (sterile alpha motif) protein, putative
Genomic Order:  2966 Name:  ? Medtr2g450720
Secondary Identifier:  ? PAC:31064918
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g450720 0.5kb upstream 0.5kb upstream 1948 true chr2: 22536608-22538555 Medicago truncatula
Medtr2g450720 0.5kb upstream 0.5kb upstream 500 false chr2: 22538056-22538555 Medicago truncatula
Medtr2g450720 0.5kb downstream 0.5kb downstream 1948 true chr2: 22536108-22538055 Medicago truncatula
Medtr2g450720 0.5kb downstream 0.5kb downstream 500 false chr2: 22536108-22536607 Medicago truncatula
Medtr2g450720 1.0kb upstream 1.0kb upstream 2448 true chr2: 22536608-22539055 Medicago truncatula
Medtr2g450720 1.0kb upstream 1.0kb upstream 1000 false chr2: 22538056-22539055 Medicago truncatula
Medtr2g450720 1.0kb downstream 1.0kb downstream 2448 true chr2: 22535608-22538055 Medicago truncatula
Medtr2g450720 1.0kb downstream 1.0kb downstream 1000 false chr2: 22535608-22536607 Medicago truncatula
Medtr2g450720 2.0kb upstream 2.0kb upstream 3448 true chr2: 22536608-22540055 Medicago truncatula
Medtr2g450720 2.0kb upstream 2.0kb upstream 2000 false chr2: 22538056-22540055 Medicago truncatula
Medtr2g450720 2.0kb downstream 2.0kb downstream 3448 true chr2: 22534608-22538055 Medicago truncatula
Medtr2g450720 2.0kb downstream 2.0kb downstream 2000 false chr2: 22534608-22536607 Medicago truncatula
Medtr2g450720 5.0kb upstream 5.0kb upstream 6448 true chr2: 22536608-22543055 Medicago truncatula
Medtr2g450720 5.0kb upstream 5.0kb upstream 5000 false chr2: 22538056-22543055 Medicago truncatula
Medtr2g450720 5.0kb downstream 5.0kb downstream 6448 true chr2: 22531608-22538055 Medicago truncatula
Medtr2g450720 5.0kb downstream 5.0kb downstream 5000 false chr2: 22531608-22536607 Medicago truncatula
Medtr2g450720 10.0kb upstream 10.0kb upstream 11448 true chr2: 22536608-22548055 Medicago truncatula
Medtr2g450720 10.0kb upstream 10.0kb upstream 10000 false chr2: 22538056-22548055 Medicago truncatula
Medtr2g450720 10.0kb downstream 10.0kb downstream 11448 true chr2: 22526608-22538055 Medicago truncatula
Medtr2g450720 10.0kb downstream 10.0kb downstream 10000 false chr2: 22526608-22536607 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027774 5273 Angiosperm View MSA
122295029 5265 Fabidae View MSA
124063450 5270 Rosid View MSA
123745602 5271 Pentapetalae View MSA
122771566 5272 Eudicot View MSA
121297384 5274 Embryophyte View MSA
123335447 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.745       High
cufflinks 0.552        
cufflinks 0.247        
cufflinks 0.664       High
cufflinks 0.238        
cufflinks 0.506        
cufflinks 0.331        
cufflinks 0.301        
cufflinks 0.176       Low

0 Strain