Gene : Medtr2g450210 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF05182 - Fip1 motif (Fip1) Description:  Fip1 [V]-like protein
Genomic Order:  2935 Name:  ? Medtr2g450210
Secondary Identifier:  ? PAC:31063728
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g450210 0.5kb upstream 0.5kb upstream 11407 true chr2: 22147361-22158767 Medicago truncatula
Medtr2g450210 0.5kb upstream 0.5kb upstream 500 false chr2: 22147361-22147860 Medicago truncatula
Medtr2g450210 0.5kb downstream 0.5kb downstream 11407 true chr2: 22147861-22159267 Medicago truncatula
Medtr2g450210 0.5kb downstream 0.5kb downstream 500 false chr2: 22158768-22159267 Medicago truncatula
Medtr2g450210 1.0kb upstream 1.0kb upstream 11907 true chr2: 22146861-22158767 Medicago truncatula
Medtr2g450210 1.0kb upstream 1.0kb upstream 1000 false chr2: 22146861-22147860 Medicago truncatula
Medtr2g450210 1.0kb downstream 1.0kb downstream 11907 true chr2: 22147861-22159767 Medicago truncatula
Medtr2g450210 1.0kb downstream 1.0kb downstream 1000 false chr2: 22158768-22159767 Medicago truncatula
Medtr2g450210 2.0kb upstream 2.0kb upstream 12907 true chr2: 22145861-22158767 Medicago truncatula
Medtr2g450210 2.0kb upstream 2.0kb upstream 2000 false chr2: 22145861-22147860 Medicago truncatula
Medtr2g450210 2.0kb downstream 2.0kb downstream 12907 true chr2: 22147861-22160767 Medicago truncatula
Medtr2g450210 2.0kb downstream 2.0kb downstream 2000 false chr2: 22158768-22160767 Medicago truncatula
Medtr2g450210 5.0kb upstream 5.0kb upstream 15907 true chr2: 22142861-22158767 Medicago truncatula
Medtr2g450210 5.0kb upstream 5.0kb upstream 5000 false chr2: 22142861-22147860 Medicago truncatula
Medtr2g450210 5.0kb downstream 5.0kb downstream 15907 true chr2: 22147861-22163767 Medicago truncatula
Medtr2g450210 5.0kb downstream 5.0kb downstream 5000 false chr2: 22158768-22163767 Medicago truncatula
Medtr2g450210 10.0kb upstream 10.0kb upstream 20907 true chr2: 22137861-22158767 Medicago truncatula
Medtr2g450210 10.0kb upstream 10.0kb upstream 10000 false chr2: 22137861-22147860 Medicago truncatula
Medtr2g450210 10.0kb downstream 10.0kb downstream 20907 true chr2: 22147861-22168767 Medicago truncatula
Medtr2g450210 10.0kb downstream 10.0kb downstream 10000 false chr2: 22158768-22168767 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308956 5265 Fabidae View MSA
124060517 5270 Rosid View MSA
123741649 5271 Pentapetalae View MSA
122790791 5272 Eudicot View MSA
122050325 5273 Angiosperm View MSA
121345578 5274 Embryophyte View MSA
123425422 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.137        
cufflinks 6.264        
cufflinks 8.597       High
cufflinks 1.494       Low
cufflinks 6.171        
cufflinks 1.734       Low
cufflinks 4.274        
cufflinks 6.915        
cufflinks 3.212        

0 Strain