Gene : Medtr2g449780 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12136//PTHR12136:SF49 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Description:  pleckstrin-like (PH) and lipid-binding START domain protein
Genomic Order:  2906 Name:  ? Medtr2g449780
Secondary Identifier:  ? PAC:31065004
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g449780 0.5kb upstream 0.5kb upstream 9706 true chr2: 21925714-21935419 Medicago truncatula
Medtr2g449780 0.5kb upstream 0.5kb upstream 500 false chr2: 21925714-21926213 Medicago truncatula
Medtr2g449780 0.5kb downstream 0.5kb downstream 9706 true chr2: 21926214-21935919 Medicago truncatula
Medtr2g449780 0.5kb downstream 0.5kb downstream 500 false chr2: 21935420-21935919 Medicago truncatula
Medtr2g449780 1.0kb upstream 1.0kb upstream 10206 true chr2: 21925214-21935419 Medicago truncatula
Medtr2g449780 1.0kb upstream 1.0kb upstream 1000 false chr2: 21925214-21926213 Medicago truncatula
Medtr2g449780 1.0kb downstream 1.0kb downstream 10206 true chr2: 21926214-21936419 Medicago truncatula
Medtr2g449780 1.0kb downstream 1.0kb downstream 1000 false chr2: 21935420-21936419 Medicago truncatula
Medtr2g449780 2.0kb upstream 2.0kb upstream 11206 true chr2: 21924214-21935419 Medicago truncatula
Medtr2g449780 2.0kb upstream 2.0kb upstream 2000 false chr2: 21924214-21926213 Medicago truncatula
Medtr2g449780 2.0kb downstream 2.0kb downstream 11206 true chr2: 21926214-21937419 Medicago truncatula
Medtr2g449780 2.0kb downstream 2.0kb downstream 2000 false chr2: 21935420-21937419 Medicago truncatula
Medtr2g449780 5.0kb upstream 5.0kb upstream 14206 true chr2: 21921214-21935419 Medicago truncatula
Medtr2g449780 5.0kb upstream 5.0kb upstream 5000 false chr2: 21921214-21926213 Medicago truncatula
Medtr2g449780 5.0kb downstream 5.0kb downstream 14206 true chr2: 21926214-21940419 Medicago truncatula
Medtr2g449780 5.0kb downstream 5.0kb downstream 5000 false chr2: 21935420-21940419 Medicago truncatula
Medtr2g449780 10.0kb upstream 10.0kb upstream 19206 true chr2: 21916214-21935419 Medicago truncatula
Medtr2g449780 10.0kb upstream 10.0kb upstream 10000 false chr2: 21916214-21926213 Medicago truncatula
Medtr2g449780 10.0kb downstream 10.0kb downstream 19206 true chr2: 21926214-21945419 Medicago truncatula
Medtr2g449780 10.0kb downstream 10.0kb downstream 10000 false chr2: 21935420-21945419 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311624 5265 Fabidae View MSA
124075658 5270 Rosid View MSA
123742206 5271 Pentapetalae View MSA
122790410 5272 Eudicot View MSA
122042175 5273 Angiosperm View MSA
121350170 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low  
cufflinks 0.001     Low Low
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low High
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain