Gene : Medtr2g445230 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22942:SF24 - DNA REPAIR PROTEIN XRCC3 Description:  DNA repair Rad51-like protein
Genomic Order:  2689 Name:  ? Medtr2g445230
Secondary Identifier:  ? PAC:31063265
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g445230 0.5kb upstream 0.5kb upstream 1436 true chr2: 19696173-19697608 Medicago truncatula
Medtr2g445230 0.5kb upstream 0.5kb upstream 500 false chr2: 19697109-19697608 Medicago truncatula
Medtr2g445230 0.5kb downstream 0.5kb downstream 1436 true chr2: 19695673-19697108 Medicago truncatula
Medtr2g445230 0.5kb downstream 0.5kb downstream 500 false chr2: 19695673-19696172 Medicago truncatula
Medtr2g445230 1.0kb upstream 1.0kb upstream 1936 true chr2: 19696173-19698108 Medicago truncatula
Medtr2g445230 1.0kb upstream 1.0kb upstream 1000 false chr2: 19697109-19698108 Medicago truncatula
Medtr2g445230 1.0kb downstream 1.0kb downstream 1936 true chr2: 19695173-19697108 Medicago truncatula
Medtr2g445230 1.0kb downstream 1.0kb downstream 1000 false chr2: 19695173-19696172 Medicago truncatula
Medtr2g445230 2.0kb upstream 2.0kb upstream 2936 true chr2: 19696173-19699108 Medicago truncatula
Medtr2g445230 2.0kb upstream 2.0kb upstream 2000 false chr2: 19697109-19699108 Medicago truncatula
Medtr2g445230 2.0kb downstream 2.0kb downstream 2936 true chr2: 19694173-19697108 Medicago truncatula
Medtr2g445230 2.0kb downstream 2.0kb downstream 2000 false chr2: 19694173-19696172 Medicago truncatula
Medtr2g445230 5.0kb upstream 5.0kb upstream 5936 true chr2: 19696173-19702108 Medicago truncatula
Medtr2g445230 5.0kb upstream 5.0kb upstream 5000 false chr2: 19697109-19702108 Medicago truncatula
Medtr2g445230 5.0kb downstream 5.0kb downstream 5936 true chr2: 19691173-19697108 Medicago truncatula
Medtr2g445230 5.0kb downstream 5.0kb downstream 5000 false chr2: 19691173-19696172 Medicago truncatula
Medtr2g445230 10.0kb upstream 10.0kb upstream 10936 true chr2: 19696173-19707108 Medicago truncatula
Medtr2g445230 10.0kb upstream 10.0kb upstream 10000 false chr2: 19697109-19707108 Medicago truncatula
Medtr2g445230 10.0kb downstream 10.0kb downstream 10936 true chr2: 19686173-19697108 Medicago truncatula
Medtr2g445230 10.0kb downstream 10.0kb downstream 10000 false chr2: 19686173-19696172 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309997 5265 Fabidae View MSA
124069391 5270 Rosid View MSA
123741903 5271 Pentapetalae View MSA
122794099 5272 Eudicot View MSA
122048125 5273 Angiosperm View MSA
121349692 5274 Embryophyte View MSA
123425830 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.249       Low
cufflinks 0.388        
cufflinks 0.444        
cufflinks 1.357       High
cufflinks 0.624        
cufflinks 1.02        
cufflinks 0.925        
cufflinks 0.26       Low
cufflinks 1.337       High

0 Strain