Gene : Medtr2g460790 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32100:SF10 - OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC Description:  fatty-acid desaturase
Genomic Order:  3214 Name:  ? Medtr2g460790
Secondary Identifier:  ? PAC:31067637
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5995 Medicago truncatula pathologic  
Mtruncatula PWY-762 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g460790 0.5kb upstream 0.5kb upstream 6324 true chr2: 25077127-25083450 Medicago truncatula
Medtr2g460790 0.5kb upstream 0.5kb upstream 500 false chr2: 25082951-25083450 Medicago truncatula
Medtr2g460790 0.5kb downstream 0.5kb downstream 6324 true chr2: 25076627-25082950 Medicago truncatula
Medtr2g460790 0.5kb downstream 0.5kb downstream 500 false chr2: 25076627-25077126 Medicago truncatula
Medtr2g460790 1.0kb upstream 1.0kb upstream 6824 true chr2: 25077127-25083950 Medicago truncatula
Medtr2g460790 1.0kb upstream 1.0kb upstream 1000 false chr2: 25082951-25083950 Medicago truncatula
Medtr2g460790 1.0kb downstream 1.0kb downstream 6824 true chr2: 25076127-25082950 Medicago truncatula
Medtr2g460790 1.0kb downstream 1.0kb downstream 1000 false chr2: 25076127-25077126 Medicago truncatula
Medtr2g460790 2.0kb upstream 2.0kb upstream 7824 true chr2: 25077127-25084950 Medicago truncatula
Medtr2g460790 2.0kb upstream 2.0kb upstream 2000 false chr2: 25082951-25084950 Medicago truncatula
Medtr2g460790 2.0kb downstream 2.0kb downstream 7824 true chr2: 25075127-25082950 Medicago truncatula
Medtr2g460790 2.0kb downstream 2.0kb downstream 2000 false chr2: 25075127-25077126 Medicago truncatula
Medtr2g460790 5.0kb upstream 5.0kb upstream 10824 true chr2: 25077127-25087950 Medicago truncatula
Medtr2g460790 5.0kb upstream 5.0kb upstream 5000 false chr2: 25082951-25087950 Medicago truncatula
Medtr2g460790 5.0kb downstream 5.0kb downstream 10824 true chr2: 25072127-25082950 Medicago truncatula
Medtr2g460790 5.0kb downstream 5.0kb downstream 5000 false chr2: 25072127-25077126 Medicago truncatula
Medtr2g460790 10.0kb upstream 10.0kb upstream 15824 true chr2: 25077127-25092950 Medicago truncatula
Medtr2g460790 10.0kb upstream 10.0kb upstream 10000 false chr2: 25082951-25092950 Medicago truncatula
Medtr2g460790 10.0kb downstream 10.0kb downstream 15824 true chr2: 25067127-25082950 Medicago truncatula
Medtr2g460790 10.0kb downstream 10.0kb downstream 10000 false chr2: 25067127-25077126 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041454 5273 Angiosperm View MSA
122308123 5265 Fabidae View MSA
124062446 5270 Rosid View MSA
123738012 5271 Pentapetalae View MSA
122787271 5272 Eudicot View MSA
121345501 5274 Embryophyte View MSA
123423794 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain