Gene : Medtr2g461920 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31251:SF22 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Description:  LIGULELESS 1 protein, putative
Genomic Order:  3272 Name:  ? Medtr2g461920
Secondary Identifier:  ? PAC:31063848
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g461920 0.5kb upstream 0.5kb upstream 5412 true chr2: 25606381-25611792 Medicago truncatula
Medtr2g461920 0.5kb upstream 0.5kb upstream 500 false chr2: 25606381-25606880 Medicago truncatula
Medtr2g461920 0.5kb downstream 0.5kb downstream 5412 true chr2: 25606881-25612292 Medicago truncatula
Medtr2g461920 0.5kb downstream 0.5kb downstream 500 false chr2: 25611793-25612292 Medicago truncatula
Medtr2g461920 1.0kb upstream 1.0kb upstream 5912 true chr2: 25605881-25611792 Medicago truncatula
Medtr2g461920 1.0kb upstream 1.0kb upstream 1000 false chr2: 25605881-25606880 Medicago truncatula
Medtr2g461920 1.0kb downstream 1.0kb downstream 5912 true chr2: 25606881-25612792 Medicago truncatula
Medtr2g461920 1.0kb downstream 1.0kb downstream 1000 false chr2: 25611793-25612792 Medicago truncatula
Medtr2g461920 2.0kb upstream 2.0kb upstream 6912 true chr2: 25604881-25611792 Medicago truncatula
Medtr2g461920 2.0kb upstream 2.0kb upstream 2000 false chr2: 25604881-25606880 Medicago truncatula
Medtr2g461920 2.0kb downstream 2.0kb downstream 6912 true chr2: 25606881-25613792 Medicago truncatula
Medtr2g461920 2.0kb downstream 2.0kb downstream 2000 false chr2: 25611793-25613792 Medicago truncatula
Medtr2g461920 5.0kb upstream 5.0kb upstream 9912 true chr2: 25601881-25611792 Medicago truncatula
Medtr2g461920 5.0kb upstream 5.0kb upstream 5000 false chr2: 25601881-25606880 Medicago truncatula
Medtr2g461920 5.0kb downstream 5.0kb downstream 9912 true chr2: 25606881-25616792 Medicago truncatula
Medtr2g461920 5.0kb downstream 5.0kb downstream 5000 false chr2: 25611793-25616792 Medicago truncatula
Medtr2g461920 10.0kb upstream 10.0kb upstream 14912 true chr2: 25596881-25611792 Medicago truncatula
Medtr2g461920 10.0kb upstream 10.0kb upstream 10000 false chr2: 25596881-25606880 Medicago truncatula
Medtr2g461920 10.0kb downstream 10.0kb downstream 14912 true chr2: 25606881-25621792 Medicago truncatula
Medtr2g461920 10.0kb downstream 10.0kb downstream 10000 false chr2: 25611793-25621792 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303700 5265 Fabidae View MSA
124069639 5270 Rosid View MSA
123751370 5271 Pentapetalae View MSA
122794305 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.171        
cufflinks 5.677       High
cufflinks 4.034       High
cufflinks 0.116        
cufflinks 3.683        
cufflinks 0.184        
cufflinks 0.19        
cufflinks 4.19       High
cufflinks 0.093     Low Low

0 Strain