Gene : Medtr3g087840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12460:SF4 - ENTH/VHS FAMILY PROTEIN Description:  ENTH/VHS family protein
Genomic Order:  4631 Name:  ? Medtr3g087840
Secondary Identifier:  ? PAC:31057157
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g087840 0.5kb upstream 0.5kb upstream 4739 true chr3: 39807160-39811898 Medicago truncatula
Medtr3g087840 0.5kb upstream 0.5kb upstream 500 false chr3: 39807160-39807659 Medicago truncatula
Medtr3g087840 0.5kb downstream 0.5kb downstream 4739 true chr3: 39807660-39812398 Medicago truncatula
Medtr3g087840 0.5kb downstream 0.5kb downstream 500 false chr3: 39811899-39812398 Medicago truncatula
Medtr3g087840 1.0kb upstream 1.0kb upstream 5239 true chr3: 39806660-39811898 Medicago truncatula
Medtr3g087840 1.0kb upstream 1.0kb upstream 1000 false chr3: 39806660-39807659 Medicago truncatula
Medtr3g087840 1.0kb downstream 1.0kb downstream 5239 true chr3: 39807660-39812898 Medicago truncatula
Medtr3g087840 1.0kb downstream 1.0kb downstream 1000 false chr3: 39811899-39812898 Medicago truncatula
Medtr3g087840 2.0kb upstream 2.0kb upstream 6239 true chr3: 39805660-39811898 Medicago truncatula
Medtr3g087840 2.0kb upstream 2.0kb upstream 2000 false chr3: 39805660-39807659 Medicago truncatula
Medtr3g087840 2.0kb downstream 2.0kb downstream 6239 true chr3: 39807660-39813898 Medicago truncatula
Medtr3g087840 2.0kb downstream 2.0kb downstream 2000 false chr3: 39811899-39813898 Medicago truncatula
Medtr3g087840 5.0kb upstream 5.0kb upstream 9239 true chr3: 39802660-39811898 Medicago truncatula
Medtr3g087840 5.0kb upstream 5.0kb upstream 5000 false chr3: 39802660-39807659 Medicago truncatula
Medtr3g087840 5.0kb downstream 5.0kb downstream 9239 true chr3: 39807660-39816898 Medicago truncatula
Medtr3g087840 5.0kb downstream 5.0kb downstream 5000 false chr3: 39811899-39816898 Medicago truncatula
Medtr3g087840 10.0kb upstream 10.0kb upstream 14239 true chr3: 39797660-39811898 Medicago truncatula
Medtr3g087840 10.0kb upstream 10.0kb upstream 10000 false chr3: 39797660-39807659 Medicago truncatula
Medtr3g087840 10.0kb downstream 10.0kb downstream 14239 true chr3: 39807660-39821898 Medicago truncatula
Medtr3g087840 10.0kb downstream 10.0kb downstream 10000 false chr3: 39811899-39821898 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312278 5265 Fabidae View MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.854        
cufflinks 1.714        
cufflinks 2.101       High
cufflinks 0.756       Low
cufflinks 1.861        
cufflinks 0.808       Low
cufflinks 1.619        
cufflinks 1.606        
cufflinks 1.411        

0 Strain