Gene : Medtr3g088410 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24193:SF83 - ANKYRIN REPEAT-CONTAINING PROTEIN Description:  ankyrin domain protein
Genomic Order:  4680 Name:  ? Medtr3g088410
Secondary Identifier:  ? PAC:31058267
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088410 0.5kb upstream 0.5kb upstream 965 true chr3: 40148549-40149513 Medicago truncatula
Medtr3g088410 0.5kb upstream 0.5kb upstream 500 false chr3: 40149014-40149513 Medicago truncatula
Medtr3g088410 0.5kb downstream 0.5kb downstream 965 true chr3: 40148049-40149013 Medicago truncatula
Medtr3g088410 0.5kb downstream 0.5kb downstream 500 false chr3: 40148049-40148548 Medicago truncatula
Medtr3g088410 1.0kb upstream 1.0kb upstream 1465 true chr3: 40148549-40150013 Medicago truncatula
Medtr3g088410 1.0kb upstream 1.0kb upstream 1000 false chr3: 40149014-40150013 Medicago truncatula
Medtr3g088410 1.0kb downstream 1.0kb downstream 1465 true chr3: 40147549-40149013 Medicago truncatula
Medtr3g088410 1.0kb downstream 1.0kb downstream 1000 false chr3: 40147549-40148548 Medicago truncatula
Medtr3g088410 2.0kb upstream 2.0kb upstream 2465 true chr3: 40148549-40151013 Medicago truncatula
Medtr3g088410 2.0kb upstream 2.0kb upstream 2000 false chr3: 40149014-40151013 Medicago truncatula
Medtr3g088410 2.0kb downstream 2.0kb downstream 2465 true chr3: 40146549-40149013 Medicago truncatula
Medtr3g088410 2.0kb downstream 2.0kb downstream 2000 false chr3: 40146549-40148548 Medicago truncatula
Medtr3g088410 5.0kb upstream 5.0kb upstream 5465 true chr3: 40148549-40154013 Medicago truncatula
Medtr3g088410 5.0kb upstream 5.0kb upstream 5000 false chr3: 40149014-40154013 Medicago truncatula
Medtr3g088410 5.0kb downstream 5.0kb downstream 5465 true chr3: 40143549-40149013 Medicago truncatula
Medtr3g088410 5.0kb downstream 5.0kb downstream 5000 false chr3: 40143549-40148548 Medicago truncatula
Medtr3g088410 10.0kb upstream 10.0kb upstream 10465 true chr3: 40148549-40159013 Medicago truncatula
Medtr3g088410 10.0kb upstream 10.0kb upstream 10000 false chr3: 40149014-40159013 Medicago truncatula
Medtr3g088410 10.0kb downstream 10.0kb downstream 10465 true chr3: 40138549-40149013 Medicago truncatula
Medtr3g088410 10.0kb downstream 10.0kb downstream 10000 false chr3: 40138549-40148548 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305508 5265 Fabidae View MSA
124064792 5270 Rosid View MSA
123738973 5271 Pentapetalae View MSA
122785979 5272 Eudicot View MSA
122045417 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346975 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.131     High Low
cufflinks 16.845     High  
cufflinks 21.32     High  
cufflinks 44.186     High High
cufflinks 14.645     High  
cufflinks 20.802     High  
cufflinks 15.902     High  
cufflinks 17.322     High  
cufflinks 20.089     High  

0 Strain