Gene : Medtr3g088190 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21450:SF8 - F8K7.18 PROTEIN Description:  DUF630 family protein
Genomic Order:  4659 Name:  ? Medtr3g088190
Secondary Identifier:  ? PAC:31057105
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088190 0.5kb upstream 0.5kb upstream 6071 true chr3: 40000440-40006510 Medicago truncatula
Medtr3g088190 0.5kb upstream 0.5kb upstream 500 false chr3: 40000440-40000939 Medicago truncatula
Medtr3g088190 0.5kb downstream 0.5kb downstream 6071 true chr3: 40000940-40007010 Medicago truncatula
Medtr3g088190 0.5kb downstream 0.5kb downstream 500 false chr3: 40006511-40007010 Medicago truncatula
Medtr3g088190 1.0kb upstream 1.0kb upstream 6571 true chr3: 39999940-40006510 Medicago truncatula
Medtr3g088190 1.0kb upstream 1.0kb upstream 1000 false chr3: 39999940-40000939 Medicago truncatula
Medtr3g088190 1.0kb downstream 1.0kb downstream 6571 true chr3: 40000940-40007510 Medicago truncatula
Medtr3g088190 1.0kb downstream 1.0kb downstream 1000 false chr3: 40006511-40007510 Medicago truncatula
Medtr3g088190 2.0kb upstream 2.0kb upstream 7571 true chr3: 39998940-40006510 Medicago truncatula
Medtr3g088190 2.0kb upstream 2.0kb upstream 2000 false chr3: 39998940-40000939 Medicago truncatula
Medtr3g088190 2.0kb downstream 2.0kb downstream 7571 true chr3: 40000940-40008510 Medicago truncatula
Medtr3g088190 2.0kb downstream 2.0kb downstream 2000 false chr3: 40006511-40008510 Medicago truncatula
Medtr3g088190 5.0kb upstream 5.0kb upstream 10571 true chr3: 39995940-40006510 Medicago truncatula
Medtr3g088190 5.0kb upstream 5.0kb upstream 5000 false chr3: 39995940-40000939 Medicago truncatula
Medtr3g088190 5.0kb downstream 5.0kb downstream 10571 true chr3: 40000940-40011510 Medicago truncatula
Medtr3g088190 5.0kb downstream 5.0kb downstream 5000 false chr3: 40006511-40011510 Medicago truncatula
Medtr3g088190 10.0kb upstream 10.0kb upstream 15571 true chr3: 39990940-40006510 Medicago truncatula
Medtr3g088190 10.0kb upstream 10.0kb upstream 10000 false chr3: 39990940-40000939 Medicago truncatula
Medtr3g088190 10.0kb downstream 10.0kb downstream 15571 true chr3: 40000940-40016510 Medicago truncatula
Medtr3g088190 10.0kb downstream 10.0kb downstream 10000 false chr3: 40006511-40016510 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305305 5265 Fabidae View MSA
124066294 5270 Rosid View MSA
123744998 5271 Pentapetalae View MSA
122791798 5272 Eudicot View MSA
122049285 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.274       High
cufflinks 1.676        
cufflinks 1.792        
cufflinks 0.813       Low
cufflinks 2.333        
cufflinks 0.65       Low
cufflinks 2.678        
cufflinks 1.284        
cufflinks 2.916        

0 Strain