Gene : Medtr3g005660 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Description:  GDSL-like lipase/acylhydrolase
Genomic Order:  41 Name:  ? Medtr3g005660
Secondary Identifier:  ? PAC:31057031
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPAS-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g005660 0.5kb upstream 0.5kb upstream 2496 true chr3: 304235-306730 Medicago truncatula
Medtr3g005660 0.5kb upstream 0.5kb upstream 500 false chr3: 306231-306730 Medicago truncatula
Medtr3g005660 0.5kb downstream 0.5kb downstream 2496 true chr3: 303735-306230 Medicago truncatula
Medtr3g005660 0.5kb downstream 0.5kb downstream 500 false chr3: 303735-304234 Medicago truncatula
Medtr3g005660 1.0kb upstream 1.0kb upstream 2996 true chr3: 304235-307230 Medicago truncatula
Medtr3g005660 1.0kb upstream 1.0kb upstream 1000 false chr3: 306231-307230 Medicago truncatula
Medtr3g005660 1.0kb downstream 1.0kb downstream 2996 true chr3: 303235-306230 Medicago truncatula
Medtr3g005660 1.0kb downstream 1.0kb downstream 1000 false chr3: 303235-304234 Medicago truncatula
Medtr3g005660 2.0kb upstream 2.0kb upstream 3996 true chr3: 304235-308230 Medicago truncatula
Medtr3g005660 2.0kb upstream 2.0kb upstream 2000 false chr3: 306231-308230 Medicago truncatula
Medtr3g005660 2.0kb downstream 2.0kb downstream 3996 true chr3: 302235-306230 Medicago truncatula
Medtr3g005660 2.0kb downstream 2.0kb downstream 2000 false chr3: 302235-304234 Medicago truncatula
Medtr3g005660 5.0kb upstream 5.0kb upstream 6996 true chr3: 304235-311230 Medicago truncatula
Medtr3g005660 5.0kb upstream 5.0kb upstream 5000 false chr3: 306231-311230 Medicago truncatula
Medtr3g005660 5.0kb downstream 5.0kb downstream 6996 true chr3: 299235-306230 Medicago truncatula
Medtr3g005660 5.0kb downstream 5.0kb downstream 5000 false chr3: 299235-304234 Medicago truncatula
Medtr3g005660 10.0kb upstream 10.0kb upstream 11996 true chr3: 304235-316230 Medicago truncatula
Medtr3g005660 10.0kb upstream 10.0kb upstream 10000 false chr3: 306231-316230 Medicago truncatula
Medtr3g005660 10.0kb downstream 10.0kb downstream 11996 true chr3: 294235-306230 Medicago truncatula
Medtr3g005660 10.0kb downstream 10.0kb downstream 10000 false chr3: 294235-304234 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298985 5265 Fabidae View MSA
124067838 5270 Rosid View MSA
123737678 5271 Pentapetalae View MSA
122786109 5272 Eudicot View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 11.982     High  
cufflinks 17.652     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 12.22     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 19.416     High  
cufflinks 0.018     Low  

0 Strain