Gene : Medtr3g088510 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10242:SF2 - N-GLYCOSYLASE/DNA LYASE Description:  8-oxoguanine-DNA glycosylase
Genomic Order:  4672 Name:  ? Medtr3g088510
Secondary Identifier:  ? PAC:31060868
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088510 0.5kb upstream 0.5kb upstream 3072 true chr3: 40105284-40108355 Medicago truncatula
Medtr3g088510 0.5kb upstream 0.5kb upstream 500 false chr3: 40107856-40108355 Medicago truncatula
Medtr3g088510 0.5kb downstream 0.5kb downstream 3072 true chr3: 40104784-40107855 Medicago truncatula
Medtr3g088510 0.5kb downstream 0.5kb downstream 500 false chr3: 40104784-40105283 Medicago truncatula
Medtr3g088510 1.0kb upstream 1.0kb upstream 3572 true chr3: 40105284-40108855 Medicago truncatula
Medtr3g088510 1.0kb upstream 1.0kb upstream 1000 false chr3: 40107856-40108855 Medicago truncatula
Medtr3g088510 1.0kb downstream 1.0kb downstream 3572 true chr3: 40104284-40107855 Medicago truncatula
Medtr3g088510 1.0kb downstream 1.0kb downstream 1000 false chr3: 40104284-40105283 Medicago truncatula
Medtr3g088510 2.0kb upstream 2.0kb upstream 4572 true chr3: 40105284-40109855 Medicago truncatula
Medtr3g088510 2.0kb upstream 2.0kb upstream 2000 false chr3: 40107856-40109855 Medicago truncatula
Medtr3g088510 2.0kb downstream 2.0kb downstream 4572 true chr3: 40103284-40107855 Medicago truncatula
Medtr3g088510 2.0kb downstream 2.0kb downstream 2000 false chr3: 40103284-40105283 Medicago truncatula
Medtr3g088510 5.0kb upstream 5.0kb upstream 7572 true chr3: 40105284-40112855 Medicago truncatula
Medtr3g088510 5.0kb upstream 5.0kb upstream 5000 false chr3: 40107856-40112855 Medicago truncatula
Medtr3g088510 5.0kb downstream 5.0kb downstream 7572 true chr3: 40100284-40107855 Medicago truncatula
Medtr3g088510 5.0kb downstream 5.0kb downstream 5000 false chr3: 40100284-40105283 Medicago truncatula
Medtr3g088510 10.0kb upstream 10.0kb upstream 12572 true chr3: 40105284-40117855 Medicago truncatula
Medtr3g088510 10.0kb upstream 10.0kb upstream 10000 false chr3: 40107856-40117855 Medicago truncatula
Medtr3g088510 10.0kb downstream 10.0kb downstream 12572 true chr3: 40095284-40107855 Medicago truncatula
Medtr3g088510 10.0kb downstream 10.0kb downstream 10000 false chr3: 40095284-40105283 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303002 5265 Fabidae View MSA
124067306 5270 Rosid View MSA
123738201 5271 Pentapetalae View MSA
122792790 5272 Eudicot View MSA
122046442 5273 Angiosperm View MSA
121344747 5274 Embryophyte View MSA
123428453 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.977       Low
cufflinks 3.466        
cufflinks 5.174        
cufflinks 5.481        
cufflinks 4.54        
cufflinks 6.909       High
cufflinks 3.134        
cufflinks 4.101        
cufflinks 4.29        

0 Strain