Gene : Medtr3g006210 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Description:  glycerophosphodiester phosphodiesterase family protein
Genomic Order:  81 Name:  ? Medtr3g006210
Secondary Identifier:  ? PAC:31053169
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7409 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g006210 0.5kb upstream 0.5kb upstream 6482 true chr3: 590665-597146 Medicago truncatula
Medtr3g006210 0.5kb upstream 0.5kb upstream 500 false chr3: 596647-597146 Medicago truncatula
Medtr3g006210 0.5kb downstream 0.5kb downstream 6482 true chr3: 590165-596646 Medicago truncatula
Medtr3g006210 0.5kb downstream 0.5kb downstream 500 false chr3: 590165-590664 Medicago truncatula
Medtr3g006210 1.0kb upstream 1.0kb upstream 6982 true chr3: 590665-597646 Medicago truncatula
Medtr3g006210 1.0kb upstream 1.0kb upstream 1000 false chr3: 596647-597646 Medicago truncatula
Medtr3g006210 1.0kb downstream 1.0kb downstream 6982 true chr3: 589665-596646 Medicago truncatula
Medtr3g006210 1.0kb downstream 1.0kb downstream 1000 false chr3: 589665-590664 Medicago truncatula
Medtr3g006210 2.0kb upstream 2.0kb upstream 7982 true chr3: 590665-598646 Medicago truncatula
Medtr3g006210 2.0kb upstream 2.0kb upstream 2000 false chr3: 596647-598646 Medicago truncatula
Medtr3g006210 2.0kb downstream 2.0kb downstream 7982 true chr3: 588665-596646 Medicago truncatula
Medtr3g006210 2.0kb downstream 2.0kb downstream 2000 false chr3: 588665-590664 Medicago truncatula
Medtr3g006210 5.0kb upstream 5.0kb upstream 10982 true chr3: 590665-601646 Medicago truncatula
Medtr3g006210 5.0kb upstream 5.0kb upstream 5000 false chr3: 596647-601646 Medicago truncatula
Medtr3g006210 5.0kb downstream 5.0kb downstream 10982 true chr3: 585665-596646 Medicago truncatula
Medtr3g006210 5.0kb downstream 5.0kb downstream 5000 false chr3: 585665-590664 Medicago truncatula
Medtr3g006210 10.0kb upstream 10.0kb upstream 15982 true chr3: 590665-606646 Medicago truncatula
Medtr3g006210 10.0kb upstream 10.0kb upstream 10000 false chr3: 596647-606646 Medicago truncatula
Medtr3g006210 10.0kb downstream 10.0kb downstream 15982 true chr3: 580665-596646 Medicago truncatula
Medtr3g006210 10.0kb downstream 10.0kb downstream 10000 false chr3: 580665-590664 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300579 5265 Fabidae View MSA
124067594 5270 Rosid View MSA
123739367 5271 Pentapetalae View MSA
122793263 5272 Eudicot View MSA
122047219 5273 Angiosperm View MSA
121349016 5274 Embryophyte View MSA
123427418 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.156        
cufflinks 0.389       High
cufflinks 0.288        
cufflinks 0.139       Low
cufflinks 0.509       High
cufflinks 0.198        
cufflinks 0.144       Low
cufflinks 0.316        
cufflinks 0.175        

0 Strain