Gene : Medtr3g006190 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF09835 - Uncharacterized protein conserved in bacteria (DUF2062) (DUF2062) Description:  cytoplasmic membrane protein
Genomic Order:  80 Name:  ? Medtr3g006190
Secondary Identifier:  ? PAC:31058563
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g006190 0.5kb upstream 0.5kb upstream 5179 true chr3: 581249-586427 Medicago truncatula
Medtr3g006190 0.5kb upstream 0.5kb upstream 500 false chr3: 585928-586427 Medicago truncatula
Medtr3g006190 0.5kb downstream 0.5kb downstream 5179 true chr3: 580749-585927 Medicago truncatula
Medtr3g006190 0.5kb downstream 0.5kb downstream 500 false chr3: 580749-581248 Medicago truncatula
Medtr3g006190 1.0kb upstream 1.0kb upstream 5679 true chr3: 581249-586927 Medicago truncatula
Medtr3g006190 1.0kb upstream 1.0kb upstream 1000 false chr3: 585928-586927 Medicago truncatula
Medtr3g006190 1.0kb downstream 1.0kb downstream 5679 true chr3: 580249-585927 Medicago truncatula
Medtr3g006190 1.0kb downstream 1.0kb downstream 1000 false chr3: 580249-581248 Medicago truncatula
Medtr3g006190 2.0kb upstream 2.0kb upstream 6679 true chr3: 581249-587927 Medicago truncatula
Medtr3g006190 2.0kb upstream 2.0kb upstream 2000 false chr3: 585928-587927 Medicago truncatula
Medtr3g006190 2.0kb downstream 2.0kb downstream 6679 true chr3: 579249-585927 Medicago truncatula
Medtr3g006190 2.0kb downstream 2.0kb downstream 2000 false chr3: 579249-581248 Medicago truncatula
Medtr3g006190 5.0kb upstream 5.0kb upstream 9679 true chr3: 581249-590927 Medicago truncatula
Medtr3g006190 5.0kb upstream 5.0kb upstream 5000 false chr3: 585928-590927 Medicago truncatula
Medtr3g006190 5.0kb downstream 5.0kb downstream 9679 true chr3: 576249-585927 Medicago truncatula
Medtr3g006190 5.0kb downstream 5.0kb downstream 5000 false chr3: 576249-581248 Medicago truncatula
Medtr3g006190 10.0kb upstream 10.0kb upstream 14679 true chr3: 581249-595927 Medicago truncatula
Medtr3g006190 10.0kb upstream 10.0kb upstream 10000 false chr3: 585928-595927 Medicago truncatula
Medtr3g006190 10.0kb downstream 10.0kb downstream 14679 true chr3: 571249-585927 Medicago truncatula
Medtr3g006190 10.0kb downstream 10.0kb downstream 10000 false chr3: 571249-581248 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299720 5265 Fabidae View MSA
124065752 5270 Rosid View MSA
123747275 5271 Pentapetalae View MSA
122793637 5272 Eudicot View MSA
122044467 5273 Angiosperm View MSA
121347646 5274 Embryophyte View MSA
123380588 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.502       High
cufflinks 4.682        
cufflinks 6.088        
cufflinks 3.163        
cufflinks 5.526        
cufflinks 1.943       Low
cufflinks 4.885        
cufflinks 5.36        
cufflinks 2.885        

0 Strain