Gene : Medtr3g005770 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12585:SF36 - SISTER CHROMATID COHESION 1 PROTEIN 3 Description:  sister chromatid cohesion 1 protein
Genomic Order:  49 Name:  ? Medtr3g005770
Secondary Identifier:  ? PAC:31060142
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g005770 0.5kb upstream 0.5kb upstream 6138 true chr3: 369758-375895 Medicago truncatula
Medtr3g005770 0.5kb upstream 0.5kb upstream 500 false chr3: 375396-375895 Medicago truncatula
Medtr3g005770 0.5kb downstream 0.5kb downstream 6138 true chr3: 369258-375395 Medicago truncatula
Medtr3g005770 0.5kb downstream 0.5kb downstream 500 false chr3: 369258-369757 Medicago truncatula
Medtr3g005770 1.0kb upstream 1.0kb upstream 6638 true chr3: 369758-376395 Medicago truncatula
Medtr3g005770 1.0kb upstream 1.0kb upstream 1000 false chr3: 375396-376395 Medicago truncatula
Medtr3g005770 1.0kb downstream 1.0kb downstream 6638 true chr3: 368758-375395 Medicago truncatula
Medtr3g005770 1.0kb downstream 1.0kb downstream 1000 false chr3: 368758-369757 Medicago truncatula
Medtr3g005770 2.0kb upstream 2.0kb upstream 7638 true chr3: 369758-377395 Medicago truncatula
Medtr3g005770 2.0kb upstream 2.0kb upstream 2000 false chr3: 375396-377395 Medicago truncatula
Medtr3g005770 2.0kb downstream 2.0kb downstream 7638 true chr3: 367758-375395 Medicago truncatula
Medtr3g005770 2.0kb downstream 2.0kb downstream 2000 false chr3: 367758-369757 Medicago truncatula
Medtr3g005770 5.0kb upstream 5.0kb upstream 10638 true chr3: 369758-380395 Medicago truncatula
Medtr3g005770 5.0kb upstream 5.0kb upstream 5000 false chr3: 375396-380395 Medicago truncatula
Medtr3g005770 5.0kb downstream 5.0kb downstream 10638 true chr3: 364758-375395 Medicago truncatula
Medtr3g005770 5.0kb downstream 5.0kb downstream 5000 false chr3: 364758-369757 Medicago truncatula
Medtr3g005770 10.0kb upstream 10.0kb upstream 15638 true chr3: 369758-385395 Medicago truncatula
Medtr3g005770 10.0kb upstream 10.0kb upstream 10000 false chr3: 375396-385395 Medicago truncatula
Medtr3g005770 10.0kb downstream 10.0kb downstream 15638 true chr3: 359758-375395 Medicago truncatula
Medtr3g005770 10.0kb downstream 10.0kb downstream 10000 false chr3: 359758-369757 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305706 5265 Fabidae View MSA
124066779 5270 Rosid View MSA
123738788 5271 Pentapetalae View MSA
122789248 5272 Eudicot View MSA
122048297 5273 Angiosperm View MSA
121349590 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.321        
cufflinks 0.632       High
cufflinks 0.11        
cufflinks 0.165        
cufflinks 0.108        
cufflinks 0.054     Low Low
cufflinks 0.301        
cufflinks 0.109        
cufflinks 0.821       High

0 Strain