Gene : Medtr2g102060 M. truncatula Mt4.0v1
Defline:  (1 of 5) KOG0092 - GTPase Rab5/YPT51 and related small G protein superfamily GTPases Description:  small GTPase family RAB protein
Genomic Order:  5605 Name:  ? Medtr2g102060
Secondary Identifier:  ? PAC:31066767
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g102060 0.5kb upstream 0.5kb upstream 2082 true chr2: 43919465-43921546 Medicago truncatula
Medtr2g102060 0.5kb upstream 0.5kb upstream 500 false chr2: 43921047-43921546 Medicago truncatula
Medtr2g102060 0.5kb downstream 0.5kb downstream 2082 true chr2: 43918965-43921046 Medicago truncatula
Medtr2g102060 0.5kb downstream 0.5kb downstream 500 false chr2: 43918965-43919464 Medicago truncatula
Medtr2g102060 1.0kb upstream 1.0kb upstream 2582 true chr2: 43919465-43922046 Medicago truncatula
Medtr2g102060 1.0kb upstream 1.0kb upstream 1000 false chr2: 43921047-43922046 Medicago truncatula
Medtr2g102060 1.0kb downstream 1.0kb downstream 2582 true chr2: 43918465-43921046 Medicago truncatula
Medtr2g102060 1.0kb downstream 1.0kb downstream 1000 false chr2: 43918465-43919464 Medicago truncatula
Medtr2g102060 2.0kb upstream 2.0kb upstream 3582 true chr2: 43919465-43923046 Medicago truncatula
Medtr2g102060 2.0kb upstream 2.0kb upstream 2000 false chr2: 43921047-43923046 Medicago truncatula
Medtr2g102060 2.0kb downstream 2.0kb downstream 3582 true chr2: 43917465-43921046 Medicago truncatula
Medtr2g102060 2.0kb downstream 2.0kb downstream 2000 false chr2: 43917465-43919464 Medicago truncatula
Medtr2g102060 5.0kb upstream 5.0kb upstream 6582 true chr2: 43919465-43926046 Medicago truncatula
Medtr2g102060 5.0kb upstream 5.0kb upstream 5000 false chr2: 43921047-43926046 Medicago truncatula
Medtr2g102060 5.0kb downstream 5.0kb downstream 6582 true chr2: 43914465-43921046 Medicago truncatula
Medtr2g102060 5.0kb downstream 5.0kb downstream 5000 false chr2: 43914465-43919464 Medicago truncatula
Medtr2g102060 10.0kb upstream 10.0kb upstream 11582 true chr2: 43919465-43931046 Medicago truncatula
Medtr2g102060 10.0kb upstream 10.0kb upstream 10000 false chr2: 43921047-43931046 Medicago truncatula
Medtr2g102060 10.0kb downstream 10.0kb downstream 11582 true chr2: 43909465-43921046 Medicago truncatula
Medtr2g102060 10.0kb downstream 10.0kb downstream 10000 false chr2: 43909465-43919464 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310856 5265 Fabidae View MSA
124070426 5270 Rosid View MSA
123753240 5271 Pentapetalae View MSA
122795840 5272 Eudicot View MSA
122049622 5273 Angiosperm View MSA
121344376 5274 Embryophyte View MSA
123424016 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low Low
cufflinks 0.086        
cufflinks 0.202        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.25       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.105        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain