Gene : Medtr2g102080 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31852:SF17 - EXPRESSED PROTEIN Description:  late embryogenesis abundant protein
Genomic Order:  5606 Name:  ? Medtr2g102080
Secondary Identifier:  ? PAC:31065867
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g102080 0.5kb upstream 0.5kb upstream 1823 true chr2: 43925525-43927347 Medicago truncatula
Medtr2g102080 0.5kb upstream 0.5kb upstream 500 false chr2: 43925525-43926024 Medicago truncatula
Medtr2g102080 0.5kb downstream 0.5kb downstream 1823 true chr2: 43926025-43927847 Medicago truncatula
Medtr2g102080 0.5kb downstream 0.5kb downstream 500 false chr2: 43927348-43927847 Medicago truncatula
Medtr2g102080 1.0kb upstream 1.0kb upstream 2323 true chr2: 43925025-43927347 Medicago truncatula
Medtr2g102080 1.0kb upstream 1.0kb upstream 1000 false chr2: 43925025-43926024 Medicago truncatula
Medtr2g102080 1.0kb downstream 1.0kb downstream 2323 true chr2: 43926025-43928347 Medicago truncatula
Medtr2g102080 1.0kb downstream 1.0kb downstream 1000 false chr2: 43927348-43928347 Medicago truncatula
Medtr2g102080 2.0kb upstream 2.0kb upstream 3323 true chr2: 43924025-43927347 Medicago truncatula
Medtr2g102080 2.0kb upstream 2.0kb upstream 2000 false chr2: 43924025-43926024 Medicago truncatula
Medtr2g102080 2.0kb downstream 2.0kb downstream 3323 true chr2: 43926025-43929347 Medicago truncatula
Medtr2g102080 2.0kb downstream 2.0kb downstream 2000 false chr2: 43927348-43929347 Medicago truncatula
Medtr2g102080 5.0kb upstream 5.0kb upstream 6323 true chr2: 43921025-43927347 Medicago truncatula
Medtr2g102080 5.0kb upstream 5.0kb upstream 5000 false chr2: 43921025-43926024 Medicago truncatula
Medtr2g102080 5.0kb downstream 5.0kb downstream 6323 true chr2: 43926025-43932347 Medicago truncatula
Medtr2g102080 5.0kb downstream 5.0kb downstream 5000 false chr2: 43927348-43932347 Medicago truncatula
Medtr2g102080 10.0kb upstream 10.0kb upstream 11323 true chr2: 43916025-43927347 Medicago truncatula
Medtr2g102080 10.0kb upstream 10.0kb upstream 10000 false chr2: 43916025-43926024 Medicago truncatula
Medtr2g102080 10.0kb downstream 10.0kb downstream 11323 true chr2: 43926025-43937347 Medicago truncatula
Medtr2g102080 10.0kb downstream 10.0kb downstream 10000 false chr2: 43927348-43937347 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308559 5265 Fabidae View MSA
124071575 5270 Rosid View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low Low
cufflinks 1.708        
cufflinks 1.581        
cufflinks 0.319        
cufflinks 3.571       High
cufflinks 1.174        
cufflinks 0.242        
cufflinks 1.553        
cufflinks 0.284        

0 Strain