Gene : Medtr2g102680 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR33427:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MQD17 Description:  MJK13.21 protein
Genomic Order:  5650 Name:  ? Medtr2g102680
Secondary Identifier:  ? PAC:31065599
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g102680 0.5kb upstream 0.5kb upstream 4383 true chr2: 44247845-44252227 Medicago truncatula
Medtr2g102680 0.5kb upstream 0.5kb upstream 500 false chr2: 44247845-44248344 Medicago truncatula
Medtr2g102680 0.5kb downstream 0.5kb downstream 4383 true chr2: 44248345-44252727 Medicago truncatula
Medtr2g102680 0.5kb downstream 0.5kb downstream 500 false chr2: 44252228-44252727 Medicago truncatula
Medtr2g102680 1.0kb upstream 1.0kb upstream 4883 true chr2: 44247345-44252227 Medicago truncatula
Medtr2g102680 1.0kb upstream 1.0kb upstream 1000 false chr2: 44247345-44248344 Medicago truncatula
Medtr2g102680 1.0kb downstream 1.0kb downstream 4883 true chr2: 44248345-44253227 Medicago truncatula
Medtr2g102680 1.0kb downstream 1.0kb downstream 1000 false chr2: 44252228-44253227 Medicago truncatula
Medtr2g102680 2.0kb upstream 2.0kb upstream 5883 true chr2: 44246345-44252227 Medicago truncatula
Medtr2g102680 2.0kb upstream 2.0kb upstream 2000 false chr2: 44246345-44248344 Medicago truncatula
Medtr2g102680 2.0kb downstream 2.0kb downstream 5883 true chr2: 44248345-44254227 Medicago truncatula
Medtr2g102680 2.0kb downstream 2.0kb downstream 2000 false chr2: 44252228-44254227 Medicago truncatula
Medtr2g102680 5.0kb upstream 5.0kb upstream 8883 true chr2: 44243345-44252227 Medicago truncatula
Medtr2g102680 5.0kb upstream 5.0kb upstream 5000 false chr2: 44243345-44248344 Medicago truncatula
Medtr2g102680 5.0kb downstream 5.0kb downstream 8883 true chr2: 44248345-44257227 Medicago truncatula
Medtr2g102680 5.0kb downstream 5.0kb downstream 5000 false chr2: 44252228-44257227 Medicago truncatula
Medtr2g102680 10.0kb upstream 10.0kb upstream 13883 true chr2: 44238345-44252227 Medicago truncatula
Medtr2g102680 10.0kb upstream 10.0kb upstream 10000 false chr2: 44238345-44248344 Medicago truncatula
Medtr2g102680 10.0kb downstream 10.0kb downstream 13883 true chr2: 44248345-44262227 Medicago truncatula
Medtr2g102680 10.0kb downstream 10.0kb downstream 10000 false chr2: 44252228-44262227 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305246 5265 Fabidae View MSA
124074735 5270 Rosid View MSA
123746273 5271 Pentapetalae View MSA
122791628 5272 Eudicot View MSA
122044746 5273 Angiosperm View MSA
121349480 5274 Embryophyte View MSA
123381326 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.04     Low Low
cufflinks 0.419        
cufflinks 0.471        
cufflinks 0.163        
cufflinks 0.423        
cufflinks 0.456        
cufflinks 0.897        
cufflinks 0.577        
cufflinks 1.1       High

0 Strain