Gene : Medtr2g103640 M. truncatula Mt4.0v1
Defline:  (1 of 42) PF07899 - Frigida-like protein (Frigida) Description:  frigida-LIKE protein
Genomic Order:  5706 Name:  ? Medtr2g103640
Secondary Identifier:  ? PAC:31064934
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g103640 0.5kb upstream 0.5kb upstream 2037 true chr2: 44622932-44624968 Medicago truncatula
Medtr2g103640 0.5kb upstream 0.5kb upstream 500 false chr2: 44622932-44623431 Medicago truncatula
Medtr2g103640 0.5kb downstream 0.5kb downstream 2037 true chr2: 44623432-44625468 Medicago truncatula
Medtr2g103640 0.5kb downstream 0.5kb downstream 500 false chr2: 44624969-44625468 Medicago truncatula
Medtr2g103640 1.0kb upstream 1.0kb upstream 2537 true chr2: 44622432-44624968 Medicago truncatula
Medtr2g103640 1.0kb upstream 1.0kb upstream 1000 false chr2: 44622432-44623431 Medicago truncatula
Medtr2g103640 1.0kb downstream 1.0kb downstream 2537 true chr2: 44623432-44625968 Medicago truncatula
Medtr2g103640 1.0kb downstream 1.0kb downstream 1000 false chr2: 44624969-44625968 Medicago truncatula
Medtr2g103640 2.0kb upstream 2.0kb upstream 3537 true chr2: 44621432-44624968 Medicago truncatula
Medtr2g103640 2.0kb upstream 2.0kb upstream 2000 false chr2: 44621432-44623431 Medicago truncatula
Medtr2g103640 2.0kb downstream 2.0kb downstream 3537 true chr2: 44623432-44626968 Medicago truncatula
Medtr2g103640 2.0kb downstream 2.0kb downstream 2000 false chr2: 44624969-44626968 Medicago truncatula
Medtr2g103640 5.0kb upstream 5.0kb upstream 6537 true chr2: 44618432-44624968 Medicago truncatula
Medtr2g103640 5.0kb upstream 5.0kb upstream 5000 false chr2: 44618432-44623431 Medicago truncatula
Medtr2g103640 5.0kb downstream 5.0kb downstream 6537 true chr2: 44623432-44629968 Medicago truncatula
Medtr2g103640 5.0kb downstream 5.0kb downstream 5000 false chr2: 44624969-44629968 Medicago truncatula
Medtr2g103640 10.0kb upstream 10.0kb upstream 11537 true chr2: 44613432-44624968 Medicago truncatula
Medtr2g103640 10.0kb upstream 10.0kb upstream 10000 false chr2: 44613432-44623431 Medicago truncatula
Medtr2g103640 10.0kb downstream 10.0kb downstream 11537 true chr2: 44623432-44634968 Medicago truncatula
Medtr2g103640 10.0kb downstream 10.0kb downstream 10000 false chr2: 44624969-44634968 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315193 5265 Fabidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.526        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain