Gene : Medtr2g103440 M. truncatula Mt4.0v1
Defline:  (1 of 50) PF05553 - Cotton fibre expressed protein (DUF761) Description:  DUF761 domain protein
Genomic Order:  5689 Name:  ? Medtr2g103440
Secondary Identifier:  ? PAC:31065257
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g103440 0.5kb upstream 0.5kb upstream 1526 true chr2: 44534463-44535988 Medicago truncatula
Medtr2g103440 0.5kb upstream 0.5kb upstream 500 false chr2: 44534463-44534962 Medicago truncatula
Medtr2g103440 0.5kb downstream 0.5kb downstream 1526 true chr2: 44534963-44536488 Medicago truncatula
Medtr2g103440 0.5kb downstream 0.5kb downstream 500 false chr2: 44535989-44536488 Medicago truncatula
Medtr2g103440 1.0kb upstream 1.0kb upstream 2026 true chr2: 44533963-44535988 Medicago truncatula
Medtr2g103440 1.0kb upstream 1.0kb upstream 1000 false chr2: 44533963-44534962 Medicago truncatula
Medtr2g103440 1.0kb downstream 1.0kb downstream 2026 true chr2: 44534963-44536988 Medicago truncatula
Medtr2g103440 1.0kb downstream 1.0kb downstream 1000 false chr2: 44535989-44536988 Medicago truncatula
Medtr2g103440 2.0kb upstream 2.0kb upstream 3026 true chr2: 44532963-44535988 Medicago truncatula
Medtr2g103440 2.0kb upstream 2.0kb upstream 2000 false chr2: 44532963-44534962 Medicago truncatula
Medtr2g103440 2.0kb downstream 2.0kb downstream 3026 true chr2: 44534963-44537988 Medicago truncatula
Medtr2g103440 2.0kb downstream 2.0kb downstream 2000 false chr2: 44535989-44537988 Medicago truncatula
Medtr2g103440 5.0kb upstream 5.0kb upstream 6026 true chr2: 44529963-44535988 Medicago truncatula
Medtr2g103440 5.0kb upstream 5.0kb upstream 5000 false chr2: 44529963-44534962 Medicago truncatula
Medtr2g103440 5.0kb downstream 5.0kb downstream 6026 true chr2: 44534963-44540988 Medicago truncatula
Medtr2g103440 5.0kb downstream 5.0kb downstream 5000 false chr2: 44535989-44540988 Medicago truncatula
Medtr2g103440 10.0kb upstream 10.0kb upstream 11026 true chr2: 44524963-44535988 Medicago truncatula
Medtr2g103440 10.0kb upstream 10.0kb upstream 10000 false chr2: 44524963-44534962 Medicago truncatula
Medtr2g103440 10.0kb downstream 10.0kb downstream 11026 true chr2: 44534963-44545988 Medicago truncatula
Medtr2g103440 10.0kb downstream 10.0kb downstream 10000 false chr2: 44535989-44545988 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312142 5265 Fabidae View MSA
124069839 5270 Rosid View MSA
123746410 5271 Pentapetalae View MSA
122795069 5272 Eudicot View MSA
122048129 5273 Angiosperm View MSA
121310856 5274 Embryophyte View MSA
123348241 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.607        
cufflinks 0.587        
cufflinks 0.894        
cufflinks 12.992     High  
cufflinks 0.764        
cufflinks 28.181     High High
cufflinks 17.194     High High
cufflinks 0.551        
cufflinks 10.705     High  

0 Strain